Detailed information of deep learning profile BP001202.1

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This page shows detailed deep learning-derived predictions and motifs for ETV4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV4
Model ID: BP001202.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0764.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P43268  
Source: ENCSR537FDJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 -0.00 0.00 0.04 0.06 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.02 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 0.00 0.02 0.04 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1983 2007 2074 1978 2003 1964 1943 2001 2052 1964 1972 1901 2029 2125 2056 1989 2213 1520 1229 1611 5255 27 1213 5 3 0 0 85 1324 1401 1630 1654 1773 1869 1803 1991 2020 1836 1939 1908 2051 2031 1915 1972 1957 1951 1895 2056 1955 2023 ]
C [ 3416 3396 3227 3415 3402 3419 3507 3458 3387 3377 3438 3355 3522 3544 3267 3553 3532 3471 3954 4759 1213 7960 72 9 10545 10552 34 1511 3416 3698 3382 3823 3219 3222 3412 3255 3316 3404 3275 3408 3286 3309 3404 3298 3200 3297 3346 3255 3334 3370 ]
G [ 3072 3000 3122 3130 3019 3049 3063 2991 3038 3167 2926 3207 2983 2806 3105 3047 2777 3366 2675 1926 3328 725 73 9 2 0 7192 8571 1760 2938 2789 3081 3454 3452 3148 3204 3189 3222 3120 3141 3097 3149 3178 3147 3209 3159 3142 3074 3132 3097 ]
T [ 2081 2149 2129 2029 2128 2120 2039 2102 2075 2044 2216 2089 2018 2077 2124 1963 2030 2195 2694 2256 756 1840 9194 10529 2 0 3326 385 4052 2515 2751 1994 2106 2009 2189 2102 2027 2090 2218 2095 2118 2063 2055 2135 2186 2145 2169 2167 2131 2062 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.00 0.01 -0.03 0.01 -0.01 -0.02 -0.02 -0.04 -0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.01 -0.00 0.02 -0.02 -0.02 0.04 0.06 -0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.01 -0.01 -0.01 -0.01 0.04 0.03 -0.01 0.00 0.01 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.01 0.02 0.04 -0.02 -0.04 0.00 -0.01 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1359

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 810

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 506

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 454

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 134

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 40

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 20

CWM

PFM

     

HCWM

1 profiles found for the same TF (ETV4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001203.1 ETV4 ENCSR714YZG HepG2 Homo sapiens MA0764.4
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