Detailed information of deep learning profile BP001203.1

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This page shows detailed deep learning-derived predictions and motifs for ETV4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV4
Model ID: BP001203.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0764.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P43268  
Source: ENCSR714YZG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.02 -0.00 0.00 0.06 0.07 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.03 0.03 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.03 0.05 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 2466 2527 2447 2428 2488 2433 2499 2455 2481 2394 2484 2364 2521 2629 2417 2437 2773 1946 1542 1970 6358 67 1308 6 1 0 2 97 1560 1719 2060 2023 2281 2264 2237 2430 2529 2332 2502 2457 2586 2468 2389 2418 2411 2322 2358 2514 2421 2449 ]
C [ 3425 3490 3391 3556 3453 3534 3605 3551 3486 3448 3529 3449 3574 3720 3343 3636 3579 3567 4199 5047 1241 8625 82 25 11716 11718 49 1545 3331 3787 3329 3953 3365 3394 3573 3417 3347 3495 3264 3420 3358 3350 3408 3436 3425 3326 3398 3303 3388 3366 ]
G [ 3233 3092 3243 3172 3079 3112 3120 3141 3238 3313 3044 3348 3159 2757 3297 3188 2915 3527 2706 1997 3199 708 70 11 1 1 7254 9539 1969 3012 2940 3300 3492 3656 3341 3238 3357 3329 3219 3347 3182 3278 3365 3246 3211 3329 3292 3221 3268 3288 ]
T [ 2595 2610 2638 2563 2699 2640 2495 2572 2514 2564 2662 2558 2465 2613 2662 2458 2452 2679 3272 2705 921 2319 10259 11677 1 0 4414 538 4859 3201 3390 2443 2581 2405 2568 2634 2486 2563 2734 2495 2593 2623 2557 2619 2672 2742 2671 2681 2642 2616 ]

Hypothetical CWM

   
A [ -0.00 -0.01 -0.00 0.02 -0.03 0.01 -0.01 -0.02 -0.03 -0.05 -0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.03 -0.02 -0.02 0.06 0.07 -0.01 0.01 0.01 0.01 0.00 0.01 ]
G [ 0.00 0.01 0.00 0.01 -0.00 -0.01 -0.01 -0.02 -0.01 0.06 0.03 -0.00 0.01 0.01 0.01 ]
T [ 0.00 0.00 0.00 -0.01 0.01 0.03 0.05 -0.02 -0.04 0.00 -0.01 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2055

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1436

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 945

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 50

CWM

PFM

     

HCWM

1 profiles found for the same TF (ETV4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001202.1 ETV4 ENCSR537FDJ HepG2 Homo sapiens MA0764.4
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