Detailed information of deep learning profile BP001202.1

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This page shows detailed deep learning-derived predictions and motifs for ETV4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV4
Model ID: BP001202.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0764.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P43268  
Source: ENCSR537FDJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.04 0.02 0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.03 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.06 0.04 0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2062 2131 2167 2169 2145 2186 2135 2055 2063 2118 2095 2218 2090 2027 2102 2189 2009 2106 1994 2751 2515 4052 385 3326 0 2 10529 9194 1840 756 2256 2694 2195 2030 1963 2124 2077 2018 2089 2216 2044 2075 2102 2039 2120 2128 2029 2129 2149 2081 ]
C [ 3097 3132 3074 3142 3159 3209 3147 3178 3149 3097 3141 3120 3222 3189 3204 3148 3452 3454 3081 2789 2938 1760 8571 7192 0 2 9 73 725 3328 1926 2675 3366 2777 3047 3105 2806 2983 3207 2926 3167 3038 2991 3063 3049 3019 3130 3122 3000 3072 ]
G [ 3370 3334 3255 3346 3297 3200 3298 3404 3309 3286 3408 3275 3404 3316 3255 3412 3222 3219 3823 3382 3698 3416 1511 34 10552 10545 9 72 7960 1213 4759 3954 3471 3532 3553 3267 3544 3522 3355 3438 3377 3387 3458 3507 3419 3402 3415 3227 3396 3416 ]
T [ 2023 1955 2056 1895 1951 1957 1972 1915 2031 2051 1908 1939 1836 2020 1991 1803 1869 1773 1654 1630 1401 1324 85 0 0 3 5 1213 27 5255 1611 1229 1520 2213 1989 2056 2125 2029 1901 1972 1964 2052 2001 1943 1964 2003 1978 2074 2007 1983 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 -0.01 0.00 -0.04 -0.02 0.04 0.02 0.01 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 -0.01 0.03 0.04 -0.01 -0.01 -0.01 -0.01 -0.00 0.01 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 -0.01 0.06 0.04 -0.02 -0.02 0.02 -0.00 0.01 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 -0.04 -0.02 -0.02 -0.01 0.01 -0.03 0.01 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1359

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 810

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 506

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 454

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 134

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 40

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 20

CWM

PFM

     

HCWM

1 profiles found for the same TF (ETV4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001203.1 ETV4 ENCSR714YZG HepG2 Homo sapiens MA0764.4
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