Detailed information of deep learning profile BP001200.1

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This page shows detailed deep learning-derived predictions and motifs for HINFP in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HINFP
Model ID: BP001200.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA0131.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BQA5  
Source: ENCSR619GFP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 0.01 -0.00 -0.00 0.04 0.04 -0.00 0.02 -0.00 -0.00 0.00 0.00 ]
G [ -0.00 -0.00 0.00 0.00 0.01 0.05 -0.00 -0.00 0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 231 221 222 211 237 224 236 248 262 217 245 249 239 169 180 148 145 199 134 196 189 81 360 234 105 4 14 8 3 5 20 186 183 161 179 194 212 231 222 217 206 218 199 226 222 215 200 236 207 190 ]
C [ 445 443 401 442 421 398 430 437 390 450 429 473 413 348 404 521 480 439 648 430 485 733 356 362 583 3 12 1267 1273 1 1087 326 311 474 447 471 440 440 458 413 413 431 465 446 438 450 445 414 414 429 ]
G [ 403 405 418 390 396 412 389 387 419 390 380 368 350 538 442 304 329 281 300 316 362 205 357 599 586 1272 5 1 8 1269 122 475 575 439 441 401 379 424 382 418 456 428 407 411 352 394 389 367 431 437 ]
T [ 210 220 248 246 235 255 234 217 218 232 235 199 287 234 263 316 335 370 207 347 253 270 216 94 15 10 1258 13 5 14 60 302 220 215 222 223 258 194 227 241 214 212 218 206 277 230 255 272 237 233 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 0.00 -0.00 -0.02 -0.00 0.00 -0.03 -0.01 -0.01 -0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.02 -0.04 -0.01 0.04 0.04 -0.03 0.02 0.00 -0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.02 0.05 -0.02 -0.04 0.01 0.04 -0.00 0.01 0.01 0.00 0.00 ]
T [ 0.00 0.01 0.00 -0.01 -0.03 -0.01 0.05 -0.01 -0.02 0.00 -0.00 0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1308

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1213

CWM

PFM

     

HCWM

1 profiles found for the same TF (HINFP) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001201.1 HINFP ENCSR621PAN HepG2 Homo sapiens MA0131.3
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