Detailed information of deep learning profile BP001201.1

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This page shows detailed deep learning-derived predictions and motifs for HINFP in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HINFP
Model ID: BP001201.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA0131.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BQA5  
Source: ENCSR621PAN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.02 0.01 0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.01 -0.00 0.02 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 627 633 560 598 565 557 601 635 543 582 580 632 617 631 649 507 842 213 75 10 56 3110 79 98 353 622 771 626 842 505 871 752 717 798 533 702 567 592 577 599 631 564 600 584 564 569 529 564 590 636 ]
C [ 1054 1066 1083 1089 1103 1076 1107 1135 1087 1062 1058 1131 1074 1132 1061 1386 1197 627 3259 11 26 132 3272 1516 1290 868 556 1008 853 910 848 875 915 1011 1445 1014 1004 1075 1149 1117 1066 1114 1061 1077 1076 1050 1044 1061 1058 1057 ]
G [ 1141 1129 1156 1123 1133 1185 1110 1053 1165 1077 1110 1034 1097 1138 1204 908 782 2398 2 3326 3227 40 9 1415 913 1039 1836 1160 1077 1481 1159 1296 1281 1083 947 1039 1264 1144 1149 1077 1098 1117 1094 1150 1121 1129 1235 1172 1116 1128 ]
T [ 550 544 573 562 571 554 554 549 577 651 624 575 584 471 458 571 551 134 36 25 63 90 12 343 816 843 209 578 600 476 494 449 459 480 447 617 537 561 497 579 577 577 617 561 611 624 564 575 608 551 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 0.02 -0.00 -0.01 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.02 -0.01 -0.01 -0.00 0.02 0.01 0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.01 -0.01 0.02 0.02 -0.01 -0.01 0.01 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 905

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 658

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 573

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 272

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 257

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 210

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 202

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 167

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 32

CWM

PFM

     

HCWM

1 profiles found for the same TF (HINFP) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001200.1 HINFP ENCSR619GFP K562 Homo sapiens MA0131.3
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