Detailed information of deep learning profile BP001187.1

  1. Home
  2. Deep Learning Profile > BP001187.1
This page shows detailed deep learning-derived predictions and motifs for TCF7 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TCF7
Model ID: BP001187.1
Cell line/tissue: HepG2
Class: High-mobility group (HMG) domain factors
Family: TCF-7-related factors
JASPAR ID: MA0769.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36402  
Source: ENCSR444LIN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.02 -0.00 0.02 0.00 -0.00 0.08 0.07 0.06 0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 0.04 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.02 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.01 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.06 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 2339 2278 2306 2311 2308 2375 2193 2257 2211 2299 2070 2113 2308 2492 2352 2318 2253 2120 2283 1987 3086 3331 5681 132 4780 491 274 7940 7740 7582 877 2024 2314 2687 2495 2046 1995 2027 2118 2073 2170 2258 2192 2178 2134 2133 2276 2240 2125 2227 ]
C [ 1737 1698 1751 1793 1807 1728 1749 1813 1864 1641 1942 1932 1690 1611 1668 1718 1863 1995 1981 2478 1594 1505 301 3288 76 76 6697 1 47 20 365 1473 2110 2003 1890 2102 1757 1868 1787 1734 1767 1793 1734 1701 1914 1933 1760 1747 1838 1775 ]
G [ 1859 1974 1855 1825 1860 1939 2078 1879 1851 1866 1846 1756 1780 1838 2044 1985 1910 1934 1905 1830 1786 2162 1118 4257 260 14 867 0 144 195 6646 3598 2390 1472 1656 1904 2159 1993 1977 2119 2022 1898 2001 1975 1894 1946 1874 1868 1932 1914 ]
T [ 2009 1994 2032 2015 1969 1902 1924 1995 2018 2138 2086 2143 2166 2003 1880 1923 1918 1895 1775 1649 1478 946 844 267 2828 7363 106 3 13 147 56 849 1130 1782 1903 1892 2033 2056 2062 2018 1985 1995 2017 2090 2002 1932 2034 2089 2049 2028 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.01 0.03 -0.03 0.04 0.01 -0.01 0.08 0.07 0.06 0.01 0.01 0.00 0.00 0.01 ]
C [ 0.01 0.01 0.01 -0.01 0.03 -0.03 -0.02 0.05 -0.05 -0.02 -0.05 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.00 0.04 -0.03 -0.05 -0.00 -0.05 -0.01 -0.02 0.05 0.02 0.01 -0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.01 0.03 0.06 -0.01 -0.01 -0.05 -0.00 -0.04 -0.01 -0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2660

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1848

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 783

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 406

CWM

PFM

     

HCWM

2 profiles found for the same TF (TCF7) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001188.1 TCF7 ENCSR501DKS GM12878 Homo sapiens MA0769.3
BP001189.1 TCF7 ENCSR863KUB K562 Homo sapiens MA0769.3
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)