Detailed information of deep learning profile BP001178.1

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This page shows detailed deep learning-derived predictions and motifs for POU2F2 in GM12891 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU2F2
Model ID: BP001178.1
Cell line/tissue: GM12891
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA0507.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P09086  
Source: ENCSR000BII
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 0.06 -0.00 0.00 -0.00 0.05 0.03 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.07 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.07 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.05 0.00 0.00 -0.00 0.00 -0.00 0.02 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1196 1252 1209 1218 1139 1234 1199 1246 1179 1204 1201 1219 1214 1174 1150 1289 1335 1949 688 4406 10 3 16 4284 4218 4353 423 858 1694 1053 995 1062 986 1055 1044 1136 1110 1202 1169 1112 1192 1192 1117 1186 1192 1139 1115 1138 1104 1155 ]
C [ 1056 1023 1115 1055 1089 1054 1021 976 1067 1017 921 943 1000 954 999 1059 1006 614 917 1 10 0 4086 1 12 23 249 1073 928 894 1076 985 1120 1059 1237 1161 1153 1106 1018 1093 1097 1052 1125 1036 998 1039 1171 1143 1118 1098 ]
G [ 1019 1044 1053 1093 1085 1113 1133 1071 1118 1112 1107 1095 1039 1067 1042 994 1014 761 259 0 109 4289 2 2 155 24 466 1246 698 1477 1313 1147 1346 1302 971 999 1022 1047 1067 1108 1018 1016 1085 1043 1113 1116 1020 1019 1028 1048 ]
T [ 1153 1105 1047 1058 1111 1023 1071 1131 1060 1091 1195 1167 1171 1229 1233 1082 1069 1100 2560 17 4295 132 320 137 39 24 3286 1247 1104 1000 1040 1230 972 1008 1172 1128 1139 1069 1170 1111 1117 1164 1097 1159 1121 1130 1118 1124 1174 1123 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.01 -0.01 0.06 -0.02 -0.02 -0.01 0.05 0.03 0.05 -0.00 -0.00 0.00 -0.01 ]
C [ 0.01 0.01 0.01 -0.01 0.01 -0.03 -0.01 -0.06 0.07 -0.04 -0.03 -0.01 -0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.01 -0.03 -0.01 0.08 -0.06 -0.01 -0.02 -0.01 -0.01 0.01 0.01 0.02 ]
T [ -0.01 -0.00 -0.00 0.00 0.03 -0.01 0.05 0.02 0.02 -0.00 0.03 -0.02 0.03 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1917

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 948

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 947

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 677

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 673

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 606

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 586

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 399

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 381

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 90

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 74

CWM

PFM

     

HCWM

1 profiles found for the same TF (POU2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001177.1 POU2F2 ENCSR000BGP GM12878 Homo sapiens MA0507.3
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