Detailed information of deep learning profile BP001177.1

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This page shows detailed deep learning-derived predictions and motifs for POU2F2 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU2F2
Model ID: BP001177.1
Cell line/tissue: GM12878
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA0507.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P09086  
Source: ENCSR000BGP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 0.04 -0.00 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.06 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.04 0.03 0.05 0.00 -0.00 -0.00 0.04 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1579 1596 1545 1626 1581 1566 1660 1503 1603 1585 1651 1425 1395 1718 1492 1354 1572 1895 4389 26 563 129 374 193 5773 20 3459 1580 1482 1411 1621 1724 1571 1604 1689 1516 1577 1532 1515 1498 1509 1503 1492 1581 1603 1556 1612 1563 1519 1523 ]
C [ 1377 1342 1453 1387 1270 1366 1383 1362 1333 1329 1347 1690 1803 1489 1700 1851 956 1557 589 72 104 1 0 5792 182 2 304 1052 1332 1318 1401 1394 1380 1483 1420 1508 1437 1441 1412 1372 1342 1392 1348 1373 1405 1384 1368 1299 1401 1471 ]
G [ 1338 1392 1446 1343 1437 1456 1335 1450 1491 1531 1552 1379 1407 1303 1418 1153 1295 1272 335 16 6 0 5556 0 11 4 1318 816 1392 1464 1344 1252 1346 1252 1264 1370 1434 1315 1393 1388 1486 1387 1514 1386 1381 1424 1387 1407 1458 1316 ]
T [ 1694 1658 1544 1632 1700 1600 1610 1673 1561 1543 1438 1494 1383 1478 1378 1630 2165 1264 675 5874 5315 5858 58 3 22 5962 907 2540 1782 1795 1622 1618 1691 1649 1615 1594 1540 1700 1668 1730 1651 1706 1634 1648 1599 1624 1621 1719 1610 1678 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.02 -0.01 0.01 0.00 0.02 0.01 0.04 -0.00 0.02 0.00 -0.00 -0.00 -0.00 ]
C [ 0.02 0.00 0.01 -0.00 -0.01 -0.01 -0.01 -0.05 0.06 -0.02 -0.02 -0.01 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 -0.00 -0.01 -0.02 -0.04 0.06 -0.05 0.00 -0.02 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.03 0.05 -0.01 -0.02 -0.02 0.04 -0.01 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2153

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1994

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1549

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1000

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 925

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 607

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 471

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 335

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 39

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 33

CWM

PFM

     

HCWM

1 profiles found for the same TF (POU2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001178.1 POU2F2 ENCSR000BII GM12891 Homo sapiens MA0507.3
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