Detailed information of deep learning profile BP001178.1

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This page shows detailed deep learning-derived predictions and motifs for POU2F2 in GM12891 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU2F2
Model ID: BP001178.1
Cell line/tissue: GM12891
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA0507.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P09086  
Source: ENCSR000BII
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.02 -0.00 0.00 -0.00 0.00 0.00 0.05 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.07 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.07 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.03 0.05 -0.00 0.00 -0.00 0.06 -0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1123 1174 1124 1118 1130 1121 1159 1097 1164 1117 1111 1170 1069 1139 1128 1172 1008 972 1230 1040 1000 1104 1247 3286 24 39 137 320 132 4295 17 2560 1100 1069 1082 1233 1229 1171 1167 1195 1091 1060 1131 1071 1023 1111 1058 1047 1105 1153 ]
C [ 1048 1028 1019 1020 1116 1113 1043 1085 1016 1018 1108 1067 1047 1022 999 971 1302 1346 1147 1313 1477 698 1246 466 24 155 2 2 4289 109 0 259 761 1014 994 1042 1067 1039 1095 1107 1112 1118 1071 1133 1113 1085 1093 1053 1044 1019 ]
G [ 1098 1118 1143 1171 1039 998 1036 1125 1052 1097 1093 1018 1106 1153 1161 1237 1059 1120 985 1076 894 928 1073 249 23 12 1 4086 0 10 1 917 614 1006 1059 999 954 1000 943 921 1017 1067 976 1021 1054 1089 1055 1115 1023 1056 ]
T [ 1155 1104 1138 1115 1139 1192 1186 1117 1192 1192 1112 1169 1202 1110 1136 1044 1055 986 1062 995 1053 1694 858 423 4353 4218 4284 16 3 10 4406 688 1949 1335 1289 1150 1174 1214 1219 1201 1204 1179 1246 1199 1234 1139 1218 1209 1252 1196 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.03 -0.02 0.03 -0.00 0.02 0.02 0.05 -0.01 0.03 0.00 -0.00 -0.00 -0.01 ]
C [ 0.02 0.01 0.01 -0.01 -0.01 -0.02 -0.01 -0.06 0.08 -0.01 -0.03 -0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 -0.00 -0.01 -0.03 -0.04 0.07 -0.06 -0.01 -0.03 0.01 -0.01 0.01 0.01 0.01 ]
T [ -0.01 0.00 -0.00 -0.00 0.05 0.03 0.05 -0.01 -0.02 -0.02 0.06 -0.01 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1917

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 948

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 947

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 677

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 673

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 606

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 586

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 399

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 381

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 90

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 74

CWM

PFM

     

HCWM

1 profiles found for the same TF (POU2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001177.1 POU2F2 ENCSR000BGP GM12878 Homo sapiens MA0507.3
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