Detailed information of deep learning profile BP001170.1

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This page shows detailed deep learning-derived predictions and motifs for MITF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MITF
Model ID: BP001170.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0620.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75030  
Source: ENCSR797SWM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.02 -0.00 0.00 0.08 -0.00 0.02 -0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.14 -0.00 0.11 -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 0.05 -0.00 0.14 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.07 -0.00 -0.00 0.00 -0.00 0.07 -0.00 -0.00 0.02 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 5480 7775 5919 5843 5557 5403 6121 7363 5730 5919 6180 6675 5798 5897 6245 7660 7659 9073 504 11 21031 14 11763 2916 10 13516 926 4421 8015 5486 5966 6822 5137 6714 6041 5765 6356 6764 6126 7533 6558 5752 7451 5749 6282 5849 6102 6198 6220 5495 ]
C [ 5019 4573 4357 4386 6083 5356 4173 4680 4835 4545 5661 4373 5143 4822 5621 3388 1789 784 1233 22022 383 21340 1156 218 29 2047 8719 8591 4693 4839 4503 4550 5383 4675 4338 5411 4611 5009 4627 4576 5520 6644 4702 4498 5659 6126 4408 4451 4495 5789 ]
G [ 6092 4653 6783 6091 4525 5019 6666 4834 5984 6360 4864 6113 6267 5972 4451 6094 8190 11812 751 11 90 462 9070 429 21955 4944 1720 2566 3376 5753 6240 4777 5984 4508 4809 4896 5746 4877 6086 4315 5044 4602 4500 5711 4929 4949 4779 6225 5993 5238 ]
T [ 5459 5049 4991 5730 5885 6272 5090 5173 5501 5226 5345 4889 4842 5359 5733 4908 4412 381 19562 6 546 234 61 18487 56 1543 10685 6472 5966 5972 5341 5901 5546 6153 6862 5978 5337 5400 5211 5626 4928 5052 5397 6092 5180 5126 6761 5176 5342 5528 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.01 0.05 -0.02 -0.05 0.08 -0.10 0.04 -0.01 -0.05 0.06 -0.05 0.00 0.00 0.00 0.00 ]
C [ 0.01 0.01 0.00 0.00 -0.02 -0.00 0.14 -0.02 0.11 -0.03 -0.02 -0.04 -0.01 0.05 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.06 -0.01 -0.04 -0.03 -0.02 0.11 -0.03 0.14 -0.00 -0.01 0.00 0.00 0.01 0.01 ]
T [ 0.00 0.00 0.01 0.00 -0.06 0.07 -0.05 -0.01 0.05 -0.09 0.07 -0.04 -0.02 0.04 0.01 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2345

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1918

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 243

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 68

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 49

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 33

CWM

PFM

     

HCWM

1 profiles found for the same TF (MITF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001169.1 MITF ENCSR000FCB K562 Homo sapiens MA0620.4
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