Detailed information of deep learning profile BP001169.1

  1. Home
  2. Deep Learning Profile > BP001169.1
This page shows detailed deep learning-derived predictions and motifs for MITF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MITF
Model ID: BP001169.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0620.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75030  
Source: ENCSR000FCB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.02 -0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.04 -0.00 0.03 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 0.02 -0.00 0.04 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.02 0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1112 1067 1071 1085 1010 1126 1110 1063 1058 1038 1161 1063 1068 1113 1158 985 1015 1008 1075 1193 1724 1040 109 2 4714 5 1709 909 9 2003 514 859 997 952 1006 1022 1036 972 1000 1104 1015 1062 1076 1095 1181 1076 1022 1038 1077 1085 ]
C [ 1457 1491 1494 1461 1457 1433 1457 1515 1420 1422 1395 1490 1474 1474 1518 1550 1577 1682 1488 1342 740 375 369 5047 92 4410 373 402 13 1136 1954 1803 1458 1420 1361 1448 1487 1463 1388 1405 1418 1439 1516 1455 1393 1507 1469 1419 1428 1478 ]
G [ 1398 1420 1461 1447 1487 1453 1486 1374 1493 1550 1526 1520 1389 1457 1446 1573 1436 1433 1445 1575 1743 3545 377 9 96 262 2956 375 5012 1421 865 1191 1546 1666 1617 1635 1485 1557 1611 1464 1606 1498 1395 1500 1464 1404 1482 1523 1518 1468 ]
T [ 1096 1085 1037 1070 1109 1051 1010 1111 1092 1053 981 990 1132 1019 941 955 1035 940 1055 953 856 103 4208 5 161 386 25 3377 29 503 1730 1210 1062 1025 1079 958 1055 1071 1064 1090 1024 1064 1076 1013 1025 1076 1090 1083 1040 1032 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 -0.01 -0.01 0.02 -0.03 0.01 0.00 -0.02 0.02 -0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.01 -0.01 0.04 -0.02 0.03 -0.02 0.00 -0.02 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 -0.01 -0.02 -0.00 -0.01 0.03 -0.02 0.04 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 0.03 -0.02 -0.00 0.01 -0.03 0.01 -0.01 -0.01 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2628

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 972

CWM

PFM

     

HCWM

1 profiles found for the same TF (MITF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001170.1 MITF ENCSR797SWM K562 Homo sapiens MA0620.4
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)