Detailed information of deep learning profile BP001170.1

  1. Home
  2. Deep Learning Profile > BP001170.1
This page shows detailed deep learning-derived predictions and motifs for MITF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MITF
Model ID: BP001170.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0620.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75030  
Source: ENCSR797SWM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.02 -0.00 -0.00 0.07 -0.00 0.00 -0.00 -0.00 0.07 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.00 0.14 -0.00 0.05 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 0.11 -0.00 0.14 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.02 -0.00 0.08 0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5528 5342 5176 6761 5126 5180 6092 5397 5052 4928 5626 5211 5400 5337 5978 6862 6153 5546 5901 5341 5972 5966 6472 10685 1543 56 18487 61 234 546 6 19562 381 4412 4908 5733 5359 4842 4889 5345 5226 5501 5173 5090 6272 5885 5730 4991 5049 5459 ]
C [ 5238 5993 6225 4779 4949 4929 5711 4500 4602 5044 4315 6086 4877 5746 4896 4809 4508 5984 4777 6240 5753 3376 2566 1720 4944 21955 429 9070 462 90 11 751 11812 8190 6094 4451 5972 6267 6113 4864 6360 5984 4834 6666 5019 4525 6091 6783 4653 6092 ]
G [ 5789 4495 4451 4408 6126 5659 4498 4702 6644 5520 4576 4627 5009 4611 5411 4338 4675 5383 4550 4503 4839 4693 8591 8719 2047 29 218 1156 21340 383 22022 1233 784 1789 3388 5621 4822 5143 4373 5661 4545 4835 4680 4173 5356 6083 4386 4357 4573 5019 ]
T [ 5495 6220 6198 6102 5849 6282 5749 7451 5752 6558 7533 6126 6764 6356 5765 6041 6714 5137 6822 5966 5486 8015 4421 926 13516 10 2916 11763 14 21031 11 504 9073 7659 7660 6245 5897 5798 6675 6180 5919 5730 7363 6121 5403 5557 5843 5919 7775 5480 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.01 0.04 -0.02 -0.04 0.07 -0.09 0.05 -0.01 -0.05 0.07 -0.06 0.00 0.01 0.00 0.00 ]
C [ 0.01 0.01 0.00 0.00 -0.01 -0.00 0.14 -0.03 0.11 -0.02 -0.03 -0.04 -0.01 0.06 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.05 -0.01 -0.04 -0.02 -0.03 0.11 -0.02 0.14 -0.00 -0.02 0.00 0.00 0.01 0.01 ]
T [ 0.00 0.00 0.00 0.00 -0.05 0.06 -0.05 -0.01 0.04 -0.10 0.08 -0.05 -0.02 0.05 0.01 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2345

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1918

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 243

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 68

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 49

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 33

CWM

PFM

     

HCWM

1 profiles found for the same TF (MITF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001169.1 MITF ENCSR000FCB K562 Homo sapiens MA0620.4
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)