Detailed information of deep learning profile BP001169.1

This page shows detailed deep learning-derived predictions and motifs for MITF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MITF
Model ID: BP001169.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0620.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75030  
Source: ENCSR000FCB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.02 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.04 -0.00 0.02 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.03 -0.00 0.04 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 1032 1040 1083 1090 1076 1025 1013 1076 1064 1024 1090 1064 1071 1055 958 1079 1025 1062 1210 1730 503 29 3377 25 386 161 5 4208 103 856 953 1055 940 1035 955 941 1019 1132 990 981 1053 1092 1111 1010 1051 1109 1070 1037 1085 1096 ]
C [ 1468 1518 1523 1482 1404 1464 1500 1395 1498 1606 1464 1611 1557 1485 1635 1617 1666 1546 1191 865 1421 5012 375 2956 262 96 9 377 3545 1743 1575 1445 1433 1436 1573 1446 1457 1389 1520 1526 1550 1493 1374 1486 1453 1487 1447 1461 1420 1398 ]
G [ 1478 1428 1419 1469 1507 1393 1455 1516 1439 1418 1405 1388 1463 1487 1448 1361 1420 1458 1803 1954 1136 13 402 373 4410 92 5047 369 375 740 1342 1488 1682 1577 1550 1518 1474 1474 1490 1395 1422 1420 1515 1457 1433 1457 1461 1494 1491 1457 ]
T [ 1085 1077 1038 1022 1076 1181 1095 1076 1062 1015 1104 1000 972 1036 1022 1006 952 997 859 514 2003 9 909 1709 5 4714 2 109 1040 1724 1193 1075 1008 1015 985 1158 1113 1068 1063 1161 1038 1058 1063 1110 1126 1010 1085 1071 1067 1112 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.01 -0.01 0.01 -0.03 0.01 -0.00 -0.02 0.03 -0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.04 -0.02 0.03 -0.01 -0.00 -0.02 -0.01 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 -0.02 0.00 -0.02 0.03 -0.02 0.04 -0.01 -0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 0.02 -0.02 0.00 0.01 -0.03 0.02 -0.01 -0.01 0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2628

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 972

1 profiles found for the same TF (MITF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001170.1 MITF ENCSR797SWM K562 Homo sapiens MA0620.4
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