Detailed information of deep learning profile BP001164.1

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This page shows detailed deep learning-derived predictions and motifs for MEIS2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEIS2
Model ID: BP001164.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: TALE-type homeo domain factors
JASPAR ID: MA1640.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14770  
Source: ENCSR851BNE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.01 0.03 0.03 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.05 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 0.06 0.00 0.00 -0.00 0.06 0.00 0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2726 2793 2737 2706 2778 2735 2800 2758 2648 2738 2759 2890 2688 2680 2823 2855 2999 3420 3670 3614 2307 1753 2376 8302 1 5807 7993 8748 20 298 7793 1821 2206 2167 2400 2522 2510 2519 2661 2609 2902 2848 2840 2658 2610 2700 2660 2613 2705 2706 ]
C [ 2199 2297 2310 2268 2251 2275 2272 2190 2199 2292 2248 2148 2239 2299 2191 2317 2409 2152 1961 1404 1968 4193 5400 283 144 1589 725 349 6 8718 290 2106 2698 2808 2594 2254 2314 2283 2077 2411 2227 2233 2178 2284 2261 2213 2356 2345 2247 2271 ]
G [ 2087 2003 2063 2071 2060 2124 2079 2092 2252 2071 2013 2080 2015 2037 2168 2197 2039 2042 2128 2915 4310 589 480 1067 10 368 70 254 1 15 73 835 2078 1484 1855 2383 2095 2264 2364 2063 2051 2219 2232 2144 2194 2201 2131 2096 2092 2080 ]
T [ 2804 2723 2706 2771 2727 2682 2665 2776 2717 2715 2796 2698 2874 2800 2634 2447 2369 2202 2057 1883 1231 3281 1560 164 9661 2052 1028 465 9789 785 1660 5054 2834 3357 2967 2657 2897 2750 2714 2733 2636 2516 2566 2730 2751 2702 2669 2762 2772 2759 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 -0.01 -0.00 0.03 -0.05 0.02 0.03 0.04 -0.03 -0.01 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.02 0.02 -0.02 0.01 0.01 -0.01 -0.01 -0.02 0.05 -0.03 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 0.02 -0.01 -0.01 0.02 -0.04 -0.02 -0.03 -0.01 -0.03 -0.04 -0.01 -0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 0.01 -0.00 -0.03 0.06 0.00 0.00 -0.02 0.06 0.01 0.00 0.02 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8207

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5724

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1709

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1299

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1297

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 602

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 495

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 487

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 266

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 162

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 80

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_23

Num. of seqlets: 35

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEIS2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001163.1 MEIS2 ENCSR830LDY HepG2 Homo sapiens MA0774.1
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