Detailed information of deep learning profile BP001163.1

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This page shows detailed deep learning-derived predictions and motifs for MEIS2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEIS2
Model ID: BP001163.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
JASPAR ID: MA0774.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14770  
Source: ENCSR830LDY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 571 616 614 595 666 563 603 581 626 588 580 577 619 602 596 509 650 627 598 444 1066 274 15 16 2107 4 2115 216 502 439 542 571 548 589 625 615 656 644 665 599 604 581 608 600 622 612 601 611 608 644 ]
C [ 585 585 569 588 537 575 553 585 568 573 594 544 544 565 548 618 542 587 423 429 279 596 2 2 6 2291 60 222 681 548 575 525 591 560 545 537 572 554 552 558 540 563 564 593 595 525 530 531 571 595 ]
G [ 573 546 543 532 540 597 566 588 552 565 549 469 565 586 578 573 572 590 365 896 631 427 38 2300 12 0 29 1609 700 350 659 737 550 625 544 600 520 556 537 606 573 588 571 584 541 611 557 587 598 542 ]
T [ 598 580 601 612 584 592 605 573 581 601 604 737 599 574 605 627 563 523 941 558 351 1030 2272 9 202 32 123 280 444 990 551 494 638 553 613 575 579 573 573 564 610 595 584 550 569 579 639 598 550 546 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.00 0.00 -0.01 -0.02 -0.00 0.01 -0.01 0.01 -0.00 -0.00 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 -0.01 -0.01 0.02 0.00 0.00 0.01 0.01 0.01 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.01 0.01 -0.00 -0.01 0.02 -0.01 -0.01 0.00 0.01 0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 -0.00 -0.01 -0.01 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 -0.01 -0.01 0.00 0.01 -0.01 0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3957

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2339

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1732

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1627

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 482

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 449

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 383

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 312

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 164

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEIS2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001164.1 MEIS2 ENCSR851BNE K562 Homo sapiens MA1640.2
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