Detailed information of deep learning profile BP001164.1

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This page shows detailed deep learning-derived predictions and motifs for MEIS2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEIS2
Model ID: BP001164.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: TALE-type homeo domain factors
JASPAR ID: MA1640.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14770  
Source: ENCSR851BNE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.01 0.00 0.00 0.06 -0.00 0.00 0.00 0.06 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.05 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.03 0.03 0.01 -0.00 0.03 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2759 2772 2762 2669 2702 2751 2730 2566 2516 2636 2733 2714 2750 2897 2657 2967 3357 2834 5054 1660 785 9789 465 1028 2052 9661 164 1560 3281 1231 1883 2057 2202 2369 2447 2634 2800 2874 2698 2796 2715 2717 2776 2665 2682 2727 2771 2706 2723 2804 ]
C [ 2080 2092 2096 2131 2201 2194 2144 2232 2219 2051 2063 2364 2264 2095 2383 1855 1484 2078 835 73 15 1 254 70 368 10 1067 480 589 4310 2915 2128 2042 2039 2197 2168 2037 2015 2080 2013 2071 2252 2092 2079 2124 2060 2071 2063 2003 2087 ]
G [ 2271 2247 2345 2356 2213 2261 2284 2178 2233 2227 2411 2077 2283 2314 2254 2594 2808 2698 2106 290 8718 6 349 725 1589 144 283 5400 4193 1968 1404 1961 2152 2409 2317 2191 2299 2239 2148 2248 2292 2199 2190 2272 2275 2251 2268 2310 2297 2199 ]
T [ 2706 2705 2613 2660 2700 2610 2658 2840 2848 2902 2609 2661 2519 2510 2522 2400 2167 2206 1821 7793 298 20 8748 7993 5807 1 8302 2376 1753 2307 3614 3670 3420 2999 2855 2823 2680 2688 2890 2759 2738 2648 2758 2800 2735 2778 2706 2737 2793 2726 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.02 0.00 0.01 0.06 -0.02 0.00 0.00 0.06 -0.03 -0.00 0.01 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.00 0.00 -0.01 -0.01 -0.04 -0.03 -0.01 -0.03 -0.02 -0.04 0.02 -0.01 -0.01 0.02 0.01 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.01 -0.03 0.05 -0.02 -0.01 -0.01 0.01 0.01 -0.02 0.02 0.02 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 -0.01 -0.03 0.04 0.03 0.02 -0.05 0.03 -0.00 -0.01 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8207

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5724

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1709

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1299

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1297

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 602

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 495

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 487

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 266

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 162

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 80

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_23

Num. of seqlets: 35

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEIS2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001163.1 MEIS2 ENCSR830LDY HepG2 Homo sapiens MA0774.1
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