Detailed information of deep learning profile BP001163.1

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This page shows detailed deep learning-derived predictions and motifs for MEIS2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEIS2
Model ID: BP001163.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
JASPAR ID: MA0774.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14770  
Source: ENCSR830LDY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 546 550 598 639 579 569 550 584 595 610 564 573 573 579 575 613 553 638 494 551 990 444 280 123 32 202 9 2272 1030 351 558 941 523 563 627 605 574 599 737 604 601 581 573 605 592 584 612 601 580 598 ]
C [ 542 598 587 557 611 541 584 571 588 573 606 537 556 520 600 544 625 550 737 659 350 700 1609 29 0 12 2300 38 427 631 896 365 590 572 573 578 586 565 469 549 565 552 588 566 597 540 532 543 546 573 ]
G [ 595 571 531 530 525 595 593 564 563 540 558 552 554 572 537 545 560 591 525 575 548 681 222 60 2291 6 2 2 596 279 429 423 587 542 618 548 565 544 544 594 573 568 585 553 575 537 588 569 585 585 ]
T [ 644 608 611 601 612 622 600 608 581 604 599 665 644 656 615 625 589 548 571 542 439 502 216 2115 4 2107 16 15 274 1066 444 598 627 650 509 596 602 619 577 580 588 626 581 603 563 666 595 614 616 571 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 0.00 -0.01 0.01 0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.01 0.00 -0.01 -0.01 0.02 -0.01 -0.00 0.01 0.01 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.01 0.00 0.00 0.02 -0.01 -0.01 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 0.01 -0.01 0.01 -0.00 -0.02 -0.01 0.00 -0.00 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3957

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2339

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1732

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1627

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 482

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 449

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 383

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 312

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 164

CWM

PFM

     

HCWM

1 profiles found for the same TF (MEIS2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001164.1 MEIS2 ENCSR851BNE K562 Homo sapiens MA1640.2
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