Detailed information of deep learning profile BP001162.1

  1. Home
  2. Deep Learning Profile > BP001162.1
This page shows detailed deep learning-derived predictions and motifs for KLF1 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: KLF1
Model ID: BP001162.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0493.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13351  
Source: ENCSR859BMR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 0.02 0.02 0.02 0.02 0.03 0.02 0.01 0.00 -0.00 0.02 0.02 0.01 0.04 0.00 0.06 0.05 0.04 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 181 200 210 233 198 188 199 197 197 174 226 203 219 179 173 164 128 130 202 136 94 12 77 124 243 171 92 46 254 6 444 0 0 0 300 196 182 174 172 190 205 200 200 190 188 193 209 226 209 195 ]
C [ 394 407 425 409 397 396 437 467 441 417 404 457 390 419 488 594 765 804 660 665 771 1061 860 623 230 215 898 857 810 1100 0 1107 1107 1028 362 375 439 434 459 444 433 423 408 433 416 400 397 407 394 401 ]
G [ 275 298 256 250 296 315 296 222 259 285 273 252 304 335 284 182 69 84 132 188 134 7 45 141 370 568 52 43 25 0 542 0 0 0 106 294 239 225 232 245 246 273 268 251 283 276 262 261 287 282 ]
T [ 257 202 216 215 216 208 175 221 210 231 204 195 194 174 162 167 145 89 113 118 108 27 125 219 264 153 65 161 18 1 121 0 0 79 339 242 247 274 244 228 223 211 231 233 220 238 239 213 217 229 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 -0.01 -0.00 0.00 0.00 -0.01 0.01 -0.01 0.01 -0.03 -0.03 -0.03 0.00 -0.00 -0.00 -0.00 ]
C [ 0.02 0.02 0.01 0.02 0.02 0.03 0.02 0.01 0.01 -0.00 0.02 0.02 0.02 0.04 -0.03 0.06 0.05 0.04 0.01 0.01 0.01 0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 0.00 0.01 0.02 -0.01 -0.00 -0.00 -0.02 0.03 -0.02 -0.01 -0.03 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.02 -0.02 -0.01 -0.03 -0.04 0.00 0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 772

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 129

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 106

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 86

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 53

CWM

PFM

     

HCWM

1 profiles found for the same TF (KLF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001161.1 KLF1 ENCSR550HCT K562 Homo sapiens MA0493.3
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)