Detailed information of deep learning profile BP001161.1

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This page shows detailed deep learning-derived predictions and motifs for KLF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: KLF1
Model ID: BP001161.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0493.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13351  
Source: ENCSR550HCT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.01 ]
G [ 0.00 0.00 -0.00 -0.00 0.02 0.02 0.02 0.00 0.03 0.00 0.00 0.01 0.00 ]
T [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 680 685 741 693 742 699 740 747 730 697 763 695 689 827 709 677 657 755 668 726 811 817 1053 1577 7 5 0 69 0 37 483 190 186 340 392 581 636 796 730 674 658 644 621 637 672 610 763 741 667 656 ]
C [ 964 1008 997 998 952 1020 976 913 968 920 918 936 1043 930 849 854 1147 1092 888 936 813 809 1139 213 3 1 2 2159 1 81 105 138 2194 2113 1363 1127 1020 915 975 1023 976 1054 1158 933 975 1027 1002 979 953 1057 ]
G [ 1144 1090 1049 1105 1062 1068 1085 1147 1087 1138 1114 1204 1172 1069 1170 1231 1093 1019 1202 1215 1231 1226 653 581 3454 3459 3464 1 3464 1473 2441 2698 323 419 1155 1000 1142 1043 1036 1023 1146 1102 1111 1133 1153 1094 1044 1063 1092 1101 ]
T [ 678 683 679 670 710 679 665 659 681 711 671 631 562 640 738 704 569 600 708 589 611 614 621 1095 2 1 0 1237 1 1875 437 440 763 594 556 758 668 712 725 746 686 666 576 763 666 735 657 683 754 652 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ -0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 0.02 -0.01 -0.00 -0.01 -0.01 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 0.02 0.02 0.02 -0.02 0.03 0.00 0.01 0.01 -0.00 -0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 -0.01 -0.01 0.01 -0.01 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1426

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 498

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 276

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 20

CWM

PFM

     

HCWM

1 profiles found for the same TF (KLF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001162.1 KLF1 ENCSR859BMR HEK293 Homo sapiens MA0493.3
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