Detailed information of deep learning profile BP001161.1

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This page shows detailed deep learning-derived predictions and motifs for KLF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: KLF1
Model ID: BP001161.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
JASPAR ID: MA0493.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13351  
Source: ENCSR550HCT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 0.03 0.00 0.02 0.02 0.02 -0.00 -0.00 0.00 0.00 ]
G [ 0.01 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 652 754 683 657 735 666 763 576 666 686 746 725 712 668 758 556 594 763 440 437 1875 1 1237 0 1 2 1095 621 614 611 589 708 600 569 704 738 640 562 631 671 711 681 659 665 679 710 670 679 683 678 ]
C [ 1101 1092 1063 1044 1094 1153 1133 1111 1102 1146 1023 1036 1043 1142 1000 1155 419 323 2698 2441 1473 3464 1 3464 3459 3454 581 653 1226 1231 1215 1202 1019 1093 1231 1170 1069 1172 1204 1114 1138 1087 1147 1085 1068 1062 1105 1049 1090 1144 ]
G [ 1057 953 979 1002 1027 975 933 1158 1054 976 1023 975 915 1020 1127 1363 2113 2194 138 105 81 1 2159 2 1 3 213 1139 809 813 936 888 1092 1147 854 849 930 1043 936 918 920 968 913 976 1020 952 998 997 1008 964 ]
T [ 656 667 741 763 610 672 637 621 644 658 674 730 796 636 581 392 340 186 190 483 37 0 69 0 5 7 1577 1053 817 811 726 668 755 657 677 709 827 689 695 763 697 730 747 740 699 742 693 741 685 680 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ -0.00 0.00 0.00 -0.00 -0.00 0.01 0.01 0.00 0.03 -0.02 0.02 0.02 0.02 -0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.01 -0.01 -0.00 -0.01 0.02 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1426

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 498

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 276

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 20

CWM

PFM

     

HCWM

1 profiles found for the same TF (KLF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001162.1 KLF1 ENCSR859BMR HEK293 Homo sapiens MA0493.3
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