Detailed information of deep learning profile BP001149.1

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This page shows detailed deep learning-derived predictions and motifs for MYNN in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYNN
Model ID: BP001149.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0132.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NPC7  
Source: ENCSR737LTZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.06 0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.01 0.01 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.08 -0.00 0.01 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.03 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.04 0.00 -0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.01 0.03 0.08 -0.00 0.03 0.02 0.02 0.03 -0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 526 523 476 505 490 489 515 478 494 503 559 564 551 540 552 652 520 276 1205 6 7 110 53 18 1761 505 148 257 192 252 1005 1067 961 461 521 598 493 447 513 424 442 516 502 537 480 495 507 510 524 462 ]
C [ 436 434 426 447 454 440 404 392 418 438 450 369 432 406 380 325 151 69 51 1895 51 608 183 4 45 178 273 305 179 140 176 354 132 320 338 339 454 412 433 467 447 392 442 439 460 418 434 431 424 417 ]
G [ 475 424 515 460 441 452 443 507 452 457 433 470 447 453 530 669 874 1385 571 7 6 55 61 5 91 35 191 157 125 1261 431 111 585 610 664 477 425 499 411 418 445 461 472 392 441 430 461 459 443 457 ]
T [ 481 537 501 506 533 537 556 541 554 520 476 515 488 519 456 272 373 188 91 10 1854 1145 1621 1891 21 1200 1306 1199 1422 265 306 386 240 527 395 504 546 560 561 609 584 549 502 550 537 575 516 518 527 582 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 0.00 -0.00 0.03 -0.02 -0.04 -0.01 -0.02 -0.01 0.07 0.01 -0.01 -0.00 -0.00 -0.00 0.03 0.02 0.02 -0.00 0.01 0.01 0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.02 -0.01 0.08 0.01 0.03 0.01 -0.04 -0.01 -0.00 0.01 -0.00 0.02 -0.01 -0.01 0.02 -0.01 0.01 0.01 0.01 0.02 ]
G [ 0.01 0.01 0.02 0.02 0.05 0.02 -0.01 -0.02 -0.03 -0.01 -0.05 0.00 -0.03 -0.00 0.01 -0.01 0.04 0.01 -0.01 0.03 0.01 0.02 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.01 -0.02 -0.02 0.06 0.02 0.04 0.08 -0.04 0.04 0.03 0.03 0.03 0.00 -0.00 0.00 -0.01 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4921

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1427

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 853

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 590

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 137

CWM

PFM

     

HCWM

2 profiles found for the same TF (MYNN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001148.1 MYNN ENCSR707BNG HEK293 Homo sapiens UN0132.2
BP001150.1 MYNN ENCSR992KLV K562 Homo sapiens UN0132.2
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