Detailed information of deep learning profile BP001148.1

  1. Home
  2. Deep Learning Profile > BP001148.1
This page shows detailed deep learning-derived predictions and motifs for MYNN in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYNN
Model ID: BP001148.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0132.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NPC7  
Source: ENCSR707BNG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.01 0.01 -0.00 0.06 0.04 0.01 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.01 0.03 0.01 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.07 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 553 545 525 544 558 533 561 543 566 548 528 545 573 493 488 454 533 527 506 837 1035 993 906 8 1939 1865 1220 1919 1 70 189 340 293 442 442 491 514 481 476 543 539 527 472 524 516 519 514 486 527 546 ]
C [ 459 443 465 461 450 460 421 439 424 441 470 436 453 520 504 491 275 466 534 328 333 313 46 28 5 16 21 10 2 666 1496 935 694 525 489 520 530 463 513 425 461 456 505 451 470 469 441 488 457 431 ]
G [ 417 456 463 448 438 421 485 437 473 438 435 446 391 421 413 316 446 382 356 436 309 360 227 29 1 34 668 18 1946 50 44 132 339 386 449 425 397 449 464 444 456 430 503 460 475 438 469 493 460 498 ]
T [ 520 505 496 496 503 535 482 530 486 522 516 522 532 515 544 688 695 574 553 348 272 283 770 1884 4 34 40 2 0 1163 220 542 623 596 569 513 508 556 496 537 493 536 469 514 488 523 525 482 505 474 ]

Hypothetical CWM

   
A [ -0.01 0.01 0.01 0.02 0.02 -0.02 0.06 0.04 0.02 0.05 -0.03 -0.02 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.00 ]
C [ 0.02 -0.00 0.01 0.00 -0.02 -0.01 -0.02 -0.00 -0.03 -0.00 -0.01 0.02 0.03 0.02 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.00 0.00 0.00 -0.01 -0.02 -0.01 0.03 -0.01 0.07 -0.02 -0.01 0.00 0.01 0.01 0.01 0.01 0.01 ]
T [ 0.00 0.00 -0.00 -0.00 0.02 0.05 -0.02 -0.01 -0.01 -0.04 -0.01 0.03 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 929

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 234

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 59

CWM

PFM

     

HCWM

2 profiles found for the same TF (MYNN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001149.1 MYNN ENCSR737LTZ K562 Homo sapiens UN0132.2
BP001150.1 MYNN ENCSR992KLV K562 Homo sapiens UN0132.2
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)