Detailed information of deep learning profile BP001149.1

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This page shows detailed deep learning-derived predictions and motifs for MYNN in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYNN
Model ID: BP001149.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0132.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NPC7  
Source: ENCSR737LTZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 -0.00 -0.00 0.03 0.02 0.02 0.03 -0.00 0.08 0.03 0.01 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 -0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.00 0.08 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.01 0.01 0.02 -0.00 -0.00 -0.00 -0.00 0.00 0.06 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 582 527 518 516 575 537 550 502 549 584 609 561 560 546 504 395 527 240 386 306 265 1422 1199 1306 1200 21 1891 1621 1145 1854 10 91 188 373 272 456 519 488 515 476 520 554 541 556 537 533 506 501 537 481 ]
C [ 457 443 459 461 430 441 392 472 461 445 418 411 499 425 477 664 610 585 111 431 1261 125 157 191 35 91 5 61 55 6 7 571 1385 874 669 530 453 447 470 433 457 452 507 443 452 441 460 515 424 475 ]
G [ 417 424 431 434 418 460 439 442 392 447 467 433 412 454 339 338 320 132 354 176 140 179 305 273 178 45 4 183 608 51 1895 51 69 151 325 380 406 432 369 450 438 418 392 404 440 454 447 426 434 436 ]
T [ 462 524 510 507 495 480 537 502 516 442 424 513 447 493 598 521 461 961 1067 1005 252 192 257 148 505 1761 18 53 110 7 6 1205 276 520 652 552 540 551 564 559 503 494 478 515 489 490 505 476 523 526 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 -0.01 0.00 -0.00 0.00 0.03 0.03 0.03 0.04 -0.04 0.08 0.04 0.02 0.06 -0.02 -0.02 -0.01 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.02 0.01 0.03 -0.01 0.01 0.04 -0.01 0.01 -0.00 -0.03 0.00 -0.05 -0.01 -0.03 -0.02 -0.01 0.02 0.05 0.02 0.02 0.01 0.01 ]
G [ 0.02 0.01 0.01 0.01 -0.01 0.02 -0.01 -0.01 0.02 -0.00 0.01 -0.00 -0.01 -0.04 0.01 0.03 0.01 0.08 -0.01 -0.02 0.00 0.01 0.01 0.01 ]
T [ 0.00 0.01 0.01 -0.00 0.02 0.02 0.03 -0.00 -0.00 -0.00 -0.01 0.01 0.07 -0.01 -0.02 -0.01 -0.04 -0.02 0.03 -0.00 0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4921

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1427

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 853

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 590

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 137

CWM

PFM

     

HCWM

2 profiles found for the same TF (MYNN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001148.1 MYNN ENCSR707BNG HEK293 Homo sapiens UN0132.2
BP001150.1 MYNN ENCSR992KLV K562 Homo sapiens UN0132.2
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