Detailed information of deep learning profile BP001148.1

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This page shows detailed deep learning-derived predictions and motifs for MYNN in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYNN
Model ID: BP001148.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: UN0132.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NPC7  
Source: ENCSR707BNG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.07 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.03 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.01 0.04 0.06 -0.00 0.01 0.01 0.01 0.01 ]

Frequency matrix

       
A [ 474 505 482 525 523 488 514 469 536 493 537 496 556 508 513 569 596 623 542 220 1163 0 2 40 34 4 1884 770 283 272 348 553 574 695 688 544 515 532 522 516 522 486 530 482 535 503 496 496 505 520 ]
C [ 498 460 493 469 438 475 460 503 430 456 444 464 449 397 425 449 386 339 132 44 50 1946 18 668 34 1 29 227 360 309 436 356 382 446 316 413 421 391 446 435 438 473 437 485 421 438 448 463 456 417 ]
G [ 431 457 488 441 469 470 451 505 456 461 425 513 463 530 520 489 525 694 935 1496 666 2 10 21 16 5 28 46 313 333 328 534 466 275 491 504 520 453 436 470 441 424 439 421 460 450 461 465 443 459 ]
T [ 546 527 486 514 519 516 524 472 527 539 543 476 481 514 491 442 442 293 340 189 70 1 1919 1220 1865 1939 8 906 993 1035 837 506 527 533 454 488 493 573 545 528 548 566 543 561 533 558 544 525 545 553 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.03 -0.01 -0.04 -0.01 -0.01 -0.02 0.05 0.02 -0.00 -0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.00 -0.01 -0.02 0.07 -0.01 0.03 -0.01 -0.02 -0.01 0.00 0.00 0.00 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.02 0.02 0.03 0.02 -0.01 -0.00 -0.03 -0.00 -0.02 -0.01 -0.02 0.00 0.01 -0.00 0.02 ]
T [ -0.00 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.02 -0.03 0.05 0.02 0.04 0.06 -0.02 0.02 0.02 0.01 0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 929

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 234

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 59

CWM

PFM

     

HCWM

2 profiles found for the same TF (MYNN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001149.1 MYNN ENCSR737LTZ K562 Homo sapiens UN0132.2
BP001150.1 MYNN ENCSR992KLV K562 Homo sapiens UN0132.2
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