Detailed information of deep learning profile BP001128.1

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This page shows detailed deep learning-derived predictions and motifs for FOXP4 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXP4
Model ID: BP001128.1
Cell line/tissue: WTC11
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA2117.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IVH2  
Source: ENCSR507RVF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.02 0.00 0.02 0.02 0.02 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 332 285 325 318 473 323 306 300 339 297 295 340 328 306 342 255 267 282 197 106 31 33 11 19 160 1199 44 374 318 531 475 316 333 557 460 285 300 341 330 329 399 356 343 431 454 351 344 298 315 359 ]
C [ 334 346 395 374 333 337 451 325 297 483 540 425 338 379 422 385 389 436 266 328 8 2 13 2 2 60 1107 507 302 310 351 327 536 305 275 344 475 461 317 366 326 314 438 365 301 314 318 369 461 312 ]
G [ 307 367 388 418 313 475 301 313 336 335 271 277 447 463 314 373 462 278 392 192 9 1430 1 3 59 73 50 116 291 219 246 388 297 285 339 466 330 341 319 410 388 461 317 334 326 331 460 458 305 444 ]
T [ 492 467 357 355 346 330 407 527 493 350 359 423 352 317 387 452 347 469 610 839 1417 0 1440 1441 1244 133 264 468 554 405 393 434 299 318 391 370 360 322 499 360 352 334 367 335 384 469 343 340 384 350 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.02 -0.02 -0.00 -0.02 -0.01 -0.00 0.02 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.01 0.01 0.01 0.00 0.00 0.00 0.00 -0.01 0.00 -0.02 -0.03 -0.01 0.02 0.01 -0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.01 0.01 0.01 0.01 0.00 0.01 0.00 -0.01 0.03 -0.02 -0.02 -0.01 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 0.01 0.01 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.00 -0.00 0.01 0.02 -0.02 0.02 0.02 0.02 -0.02 -0.01 -0.01 -0.00 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1977

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1198

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 862

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 743

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 625

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 572

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 557

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 514

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 489

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 462

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 96

CWM

PFM

     

HCWM

1 profiles found for the same TF (FOXP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001127.1 FOXP4 ENCSR232LLP HepG2 Homo sapiens MA2117.1
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