Detailed information of deep learning profile BP001128.1

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This page shows detailed deep learning-derived predictions and motifs for FOXP4 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXP4
Model ID: BP001128.1
Cell line/tissue: WTC11
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA2117.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IVH2  
Source: ENCSR507RVF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.02 0.02 0.02 0.00 0.02 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 350 384 340 343 469 384 335 367 334 352 360 499 322 360 370 391 318 299 434 393 405 554 468 264 133 1244 1441 1440 0 1417 839 610 469 347 452 387 317 352 423 359 350 493 527 407 330 346 355 357 467 492 ]
C [ 444 305 458 460 331 326 334 317 461 388 410 319 341 330 466 339 285 297 388 246 219 291 116 50 73 59 3 1 1430 9 192 392 278 462 373 314 463 447 277 271 335 336 313 301 475 313 418 388 367 307 ]
G [ 312 461 369 318 314 301 365 438 314 326 366 317 461 475 344 275 305 536 327 351 310 302 507 1107 60 2 2 13 2 8 328 266 436 389 385 422 379 338 425 540 483 297 325 451 337 333 374 395 346 334 ]
T [ 359 315 298 344 351 454 431 343 356 399 329 330 341 300 285 460 557 333 316 475 531 318 374 44 1199 160 19 11 33 31 106 197 282 267 255 342 306 328 340 295 297 339 300 306 323 473 318 325 285 332 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.00 -0.01 -0.01 -0.02 0.02 0.02 0.02 -0.02 0.02 0.01 -0.00 -0.00 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.01 0.01 0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.02 -0.02 0.03 -0.01 0.00 0.01 0.00 0.01 0.01 0.01 0.01 0.01 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.01 0.01 0.00 0.00 -0.00 0.01 0.02 -0.01 -0.03 -0.02 0.00 -0.01 0.00 0.00 0.00 0.00 0.01 0.01 0.01 0.01 0.00 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 0.02 -0.00 -0.01 -0.02 -0.00 -0.02 -0.02 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1977

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1198

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 862

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 743

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 625

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 572

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 557

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 514

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 489

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 462

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 96

CWM

PFM

     

HCWM

1 profiles found for the same TF (FOXP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001127.1 FOXP4 ENCSR232LLP HepG2 Homo sapiens MA2117.1
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