Detailed information of deep learning profile BP001127.1

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This page shows detailed deep learning-derived predictions and motifs for FOXP4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXP4
Model ID: BP001127.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA2117.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IVH2  
Source: ENCSR232LLP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.04 0.00 0.05 0.04 0.04 -0.00 0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 2759 3093 2793 2738 2723 2640 2775 2771 2850 2746 2719 2801 2613 2770 2704 2734 2844 2895 2516 2119 2232 2466 2049 139 300 22 22 14 6813 357 3165 1136 4263 2515 1972 2614 3051 3012 2606 2987 3012 2874 2863 2861 2937 2707 2820 3115 2935 2834 ]
C [ 2652 2403 2477 2423 2445 2596 2395 2467 2538 2612 2254 2293 2714 2574 2609 2467 2535 2601 2410 2263 2863 2096 2617 15 0 12 7 12 32 7505 2220 3063 704 2046 2917 2380 2379 2408 2367 2273 2394 2340 2413 2459 2368 2625 2565 2345 2572 2470 ]
G [ 2416 2376 2569 2395 2400 2469 2665 2571 2476 2385 2459 2335 2374 2247 2302 2298 2486 2134 2529 2796 2761 1635 1668 10 10551 1 271 1203 3800 178 325 1362 1182 3396 2917 3050 2544 2412 2577 2561 2534 2483 2433 2509 2485 2339 2396 2339 2362 2454 ]
T [ 3027 2982 3015 3298 3286 3149 3019 3045 2990 3111 3422 3425 3153 3263 3239 3355 2989 3224 3399 3676 2998 4657 4520 10690 3 10819 10554 9625 209 2814 5144 5293 4705 2897 3048 2810 2880 3022 3304 3033 2914 3157 3145 3025 3064 3183 3073 3055 2985 3096 ]

Hypothetical CWM

   
A [ -0.01 -0.00 0.00 -0.00 -0.01 0.02 -0.01 -0.01 -0.02 0.04 -0.00 0.01 -0.00 0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.01 -0.01 -0.02 -0.01 -0.03 -0.03 -0.02 0.03 0.01 0.02 -0.00 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.01 0.05 -0.02 0.01 0.02 0.03 -0.00 0.00 0.01 0.01 0.02 ]
T [ 0.00 -0.00 0.00 0.01 0.04 -0.03 0.05 0.04 0.04 -0.01 0.01 0.01 0.01 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4719

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1774

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1739

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1716

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1341

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 778

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 32

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 23

CWM

PFM

     

HCWM

1 profiles found for the same TF (FOXP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001128.1 FOXP4 ENCSR507RVF WTC11 Homo sapiens MA2117.1
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