JASPAR - ETS1 - BP001126.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ETS1 in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ETS1
Model ID:	BP001126.1
Cell line/tissue:	GM23338
Class:	Tryptophan cluster factors
Family:	Ets-related
JASPAR ID:	MA0098.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P14921
Source:	ENCSR534VHI
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 5731

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.02	0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	-0.00	0.01	0.02	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	]
G [	0.00	0.00	0.00	0.00	-0.00	0.04	0.03	0.00	0.00	0.01	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	-0.00	-0.00	]

Frequency matrix

A [	1287	1188	1170	1158	1223	1172	1245	1301	1207	1169	1122	1156	1134	1237	1172	1189	1200	1135	1239	1228	1060	1706	1660	2271	375	2108	0	0	5667	5329	1565	416	961	1281	1172	1134	1056	1077	1042	1070	1118	1244	1126	1076	1139	1123	1086	1182	1125	1177	]
C [	1706	1674	1719	1757	1681	1694	1725	1655	1705	1748	1699	1673	1706	1716	1698	1755	1686	1782	1891	1818	1587	1331	1392	942	4182	3609	0	34	42	18	118	1539	944	1575	1995	1455	1721	1834	1716	1650	1745	1541	1618	1754	1563	1655	1709	1606	1607	1710	]
G [	1709	1758	1781	1749	1791	1810	1689	1748	1806	1728	1850	1757	1745	1716	1851	1739	1767	1842	1656	1775	2207	2005	1901	2137	1136	14	5730	5652	18	12	3989	227	3084	2345	1643	1877	1806	1614	1746	1901	1885	1856	1994	1884	1998	1854	1856	1784	1898	1785	]
T [	1029	1111	1061	1067	1036	1055	1072	1027	1013	1086	1060	1145	1146	1062	1010	1048	1078	972	945	910	877	689	778	381	38	0	1	45	4	372	59	3549	742	530	921	1265	1148	1206	1227	1110	983	1090	993	1017	1031	1099	1080	1159	1101	1059	]

Hypothetical CWM

A [	-0.00	0.00	0.00	0.01	-0.00	0.01	-0.03	-0.02	0.03	0.02	0.01	-0.01	-0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	0.00	-0.00	0.01	0.03	-0.00	-0.01	-0.02	-0.01	-0.01	0.01	-0.00	0.00	0.00	-0.00	]
G [	0.00	0.00	0.00	0.00	0.00	-0.01	0.04	0.03	-0.01	-0.02	0.01	-0.01	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.01	-0.01	-0.03	-0.02	-0.01	-0.01	0.01	-0.01	0.01	-0.00	-0.00	-0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2122

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 164

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 23

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 21

CWM

PFM

HCWM

3 profiles found for the same TF (ETS1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001123.1	ETS1	ENCSR000BKA	GM12878	Homo sapiens	MA0098.4
BP001124.1	ETS1	ENCSR000BKQ	K562	Homo sapiens	MA0098.4
BP001125.1	ETS1	ENCSR000BPU	A549	Homo sapiens	MA0098.4