Detailed information of deep learning profile BP001125.1

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This page shows detailed deep learning-derived predictions and motifs for ETS1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETS1
Model ID: BP001125.1
Cell line/tissue: A549
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0098.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14921  
Source: ENCSR000BPU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.02 0.02 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.03 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.02 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 409 415 439 434 467 467 457 409 434 452 421 432 407 418 456 398 382 353 358 562 583 601 102 69 0 17 2226 2222 347 119 473 588 444 334 315 398 323 351 369 486 400 410 433 381 380 407 404 413 430 407 ]
C [ 753 760 744 773 738 729 741 831 761 700 745 732 762 796 739 718 820 864 725 661 740 548 1698 2219 1 22 36 24 137 557 336 623 757 522 767 744 768 805 790 608 724 712 690 748 739 670 692 728 685 691 ]
G [ 740 755 689 712 711 728 737 678 714 711 690 676 737 648 668 817 684 625 855 839 638 962 469 6 2294 2239 11 4 1745 88 1198 803 547 811 699 561 750 693 767 744 803 762 760 760 726 758 771 749 780 782 ]
T [ 393 365 423 376 379 371 360 377 386 432 439 455 389 433 432 362 409 453 357 233 334 184 26 1 0 17 22 45 66 1531 288 281 547 628 514 592 454 446 369 457 368 411 412 406 450 460 428 405 400 415 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.01 -0.01 -0.02 -0.01 0.02 0.02 0.00 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.01 0.03 -0.00 -0.01 -0.01 -0.00 -0.01 0.01 -0.00 0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.00 0.03 0.02 -0.01 -0.01 0.01 -0.01 0.01 0.00 -0.00 0.00 ]
T [ -0.00 -0.01 -0.00 -0.01 -0.01 -0.03 -0.02 -0.01 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1747

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 188

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 135

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 101

CWM

PFM

     

HCWM

3 profiles found for the same TF (ETS1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001123.1 ETS1 ENCSR000BKA GM12878 Homo sapiens MA0098.4
BP001124.1 ETS1 ENCSR000BKQ K562 Homo sapiens MA0098.4
BP001126.1 ETS1 ENCSR534VHI GM23338 Homo sapiens MA0098.4
Showing 3 profiles of page 1 from 1 pages
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