Detailed information of deep learning profile BP001042.1

  1. Home
  2. Deep Learning Profile > BP001042.1
This page shows detailed deep learning-derived predictions and motifs for NFE2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFE2
Model ID: BP001042.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA0501.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16621  
Source: ENCSR552YGL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 0.00 0.05 -0.00 0.00 0.13 -0.00 -0.00 0.00 0.04 0.00 -0.00 0.04 0.00 0.01 0.01 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.07 -0.00 0.04 -0.00 -0.00 0.10 -0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.01 0.01 0.01 -0.00 0.14 -0.00 0.00 0.00 -0.00 0.00 0.06 0.00 0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.13 0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 0.00 0.01 0.01 ]

Frequency matrix

       
A [ 5634 6293 5596 5796 5546 5441 5933 5441 5354 5776 5456 6086 5388 5415 5385 7169 4705 6203 13166 17 34 19115 704 4490 3836 12448 1732 741 13748 7247 7374 7072 5067 4423 5067 5363 5595 5390 5530 5337 5584 5782 6157 5859 6078 6235 6050 5842 6045 6027 ]
C [ 4317 3790 4224 3732 4121 4683 3974 4259 4039 4468 4844 4039 3959 4770 4946 2911 4628 4482 1035 38 17 38 14430 565 10003 334 495 16287 1333 3052 1699 1930 3768 4153 4258 4343 4048 4094 4622 3947 4339 3947 3752 3963 3870 3739 3891 3801 3715 3960 ]
G [ 4015 3945 4020 3933 4388 4023 3949 3996 4215 4028 3771 3757 4643 4146 4327 4337 6392 5817 4900 10 18886 29 2493 873 2055 2909 14826 1414 1582 3972 2518 1628 1982 3062 3872 3930 4340 3893 3770 3856 4076 4158 4144 3871 4025 3741 3809 4069 4087 4068 ]
T [ 5284 5222 5410 5789 5195 5103 5394 5554 5642 4978 5179 5368 5260 4919 4592 4833 3525 2748 149 19185 313 68 1623 13322 3356 3559 2197 808 2587 4979 7659 8620 8433 7612 6053 5614 5267 5873 5328 6110 5251 5363 5197 5557 5277 5535 5500 5538 5403 5195 ]

Hypothetical CWM

   
A [ 0.00 0.02 -0.01 0.01 0.07 -0.08 -0.06 0.13 -0.02 0.01 0.03 0.05 -0.00 -0.02 0.05 0.01 0.02 0.02 0.00 ]
C [ 0.02 0.00 0.03 0.03 -0.01 0.02 -0.06 -0.05 0.09 -0.03 0.07 -0.01 -0.02 0.11 -0.02 0.01 -0.02 -0.01 0.00 ]
G [ 0.01 0.02 0.03 0.04 0.05 -0.08 0.15 -0.06 0.04 0.02 -0.02 0.04 0.08 0.02 0.03 0.01 -0.01 -0.03 -0.02 ]
T [ -0.00 -0.01 -0.00 -0.01 -0.07 0.13 0.03 -0.03 0.01 0.07 0.00 -0.01 0.02 -0.01 -0.01 0.01 0.02 0.02 0.02 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3838

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 334

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 286

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 157

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 150

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 70

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 39

CWM

PFM

     

HCWM

3 profiles found for the same TF (NFE2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001040.1 NFE2 ENCSR000FAF K562 Homo sapiens MA0501.2
BP001041.1 NFE2 ENCSR000FCC K562 Homo sapiens MA0501.2
BP001043.1 NFE2 ENCSR983FBD HepG2 Homo sapiens MA0501.2
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)