Detailed information of deep learning profile BP001041.1

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This page shows detailed deep learning-derived predictions and motifs for NFE2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFE2
Model ID: BP001041.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA0501.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16621  
Source: ENCSR000FCC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.05 -0.00 -0.00 0.00 0.12 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.00 0.00 -0.00 0.06 0.00 -0.00 0.00 0.00 -0.00 0.12 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.08 -0.00 -0.00 0.04 -0.00 0.05 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ 0.01 0.00 0.00 0.03 -0.00 -0.00 0.04 0.00 -0.00 -0.00 0.11 0.00 -0.00 0.04 0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 5848 6098 6122 6488 5879 6283 5875 5975 5691 7239 5976 6689 6079 6400 6361 8381 9292 9664 8666 5403 3200 1031 2428 3048 2618 17194 1859 45 90 23303 196 3493 3988 5402 4838 5360 5991 5844 5630 5388 6319 6073 6240 5698 5822 6596 5892 5816 6177 6284 ]
C [ 5324 5454 5132 4997 5291 5012 5596 5469 5441 5121 4998 5168 5568 5310 5271 4275 3098 2876 3832 5511 2397 1988 19000 2815 1961 1065 3437 27 23248 3 6989 7304 8066 5917 5579 5452 6200 5044 5181 5334 5643 5304 5130 5231 5832 5318 5468 5251 5415 5271 ]
G [ 5056 5063 5255 4927 5199 5312 5200 5282 5840 5108 6340 5689 5388 5780 5638 5811 5466 3166 2998 4420 2253 19370 759 369 15128 687 17138 44 15 31 1770 5257 5798 3886 6941 6342 5232 5414 6470 5992 5552 5789 5316 6271 5611 5052 5674 5170 5772 5827 ]
T [ 7127 6740 6846 6943 6986 6748 6684 6629 6383 5887 6041 5809 6320 5865 6085 4888 5499 7649 7859 8021 15505 966 1168 17123 3648 4409 921 23239 2 18 14400 7301 5503 8150 5997 6201 5932 7053 6074 6641 5841 6189 6669 6155 6090 6389 6321 7118 5991 5973 ]

Hypothetical CWM

   
A [ 0.02 0.02 0.02 0.01 -0.01 -0.01 0.02 -0.02 -0.01 0.06 -0.00 -0.03 0.02 0.12 -0.06 -0.01 0.00 -0.01 -0.00 ]
C [ -0.02 -0.02 -0.00 0.01 0.03 0.01 0.07 0.03 -0.02 0.02 0.04 -0.04 0.12 -0.07 0.04 0.03 0.02 0.02 0.01 ]
G [ 0.00 -0.01 -0.01 0.01 -0.02 0.09 -0.01 -0.02 0.06 -0.04 0.07 -0.02 -0.05 0.01 -0.00 0.02 0.02 0.00 0.01 ]
T [ 0.00 0.02 0.01 0.01 0.04 -0.03 -0.01 0.05 0.02 0.00 -0.03 0.11 -0.06 -0.08 0.06 0.01 -0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4795

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1565

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 708

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 206

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 174

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 69

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 33

CWM

PFM

     

HCWM

3 profiles found for the same TF (NFE2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001040.1 NFE2 ENCSR000FAF K562 Homo sapiens MA0501.2
BP001042.1 NFE2 ENCSR552YGL K562 Homo sapiens MA0501.2
BP001043.1 NFE2 ENCSR983FBD HepG2 Homo sapiens MA0501.2
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