Detailed information of deep learning profile BP001042.1

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This page shows detailed deep learning-derived predictions and motifs for NFE2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFE2
Model ID: BP001042.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA0501.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16621  
Source: ENCSR552YGL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.00 -0.00 -0.00 0.00 0.00 0.00 0.05 -0.00 -0.00 0.00 0.13 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 0.00 0.00 0.06 0.00 -0.00 0.00 0.00 -0.00 0.14 -0.00 0.01 0.01 0.01 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.10 -0.00 -0.00 0.04 -0.00 0.07 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ 0.01 0.01 0.00 0.04 -0.00 0.00 0.04 0.00 -0.00 -0.00 0.13 0.00 -0.00 0.05 0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 5195 5403 5538 5500 5535 5277 5557 5197 5363 5251 6110 5328 5873 5267 5614 6053 7612 8433 8620 7659 4979 2587 808 2197 3559 3356 13322 1623 68 313 19185 149 2748 3525 4833 4592 4919 5260 5368 5179 4978 5642 5554 5394 5103 5195 5789 5410 5222 5284 ]
C [ 4068 4087 4069 3809 3741 4025 3871 4144 4158 4076 3856 3770 3893 4340 3930 3872 3062 1982 1628 2518 3972 1582 1414 14826 2909 2055 873 2493 29 18886 10 4900 5817 6392 4337 4327 4146 4643 3757 3771 4028 4215 3996 3949 4023 4388 3933 4020 3945 4015 ]
G [ 3960 3715 3801 3891 3739 3870 3963 3752 3947 4339 3947 4622 4094 4048 4343 4258 4153 3768 1930 1699 3052 1333 16287 495 334 10003 565 14430 38 17 38 1035 4482 4628 2911 4946 4770 3959 4039 4844 4468 4039 4259 3974 4683 4121 3732 4224 3790 4317 ]
T [ 6027 6045 5842 6050 6235 6078 5859 6157 5782 5584 5337 5530 5390 5595 5363 5067 4423 5067 7072 7374 7247 13748 741 1732 12448 3836 4490 704 19115 34 17 13166 6203 4705 7169 5385 5415 5388 6086 5456 5776 5354 5441 5933 5441 5546 5796 5596 6293 5634 ]

Hypothetical CWM

   
A [ 0.02 0.02 0.02 0.01 -0.01 -0.01 0.02 -0.01 0.00 0.07 0.01 -0.03 0.03 0.13 -0.07 -0.01 -0.00 -0.01 -0.00 ]
C [ -0.02 -0.03 -0.01 0.01 0.03 0.02 0.08 0.04 -0.02 0.02 0.04 -0.06 0.15 -0.08 0.05 0.04 0.03 0.02 0.01 ]
G [ 0.00 -0.01 -0.02 0.01 -0.02 0.11 -0.02 -0.01 0.07 -0.03 0.09 -0.05 -0.06 0.02 -0.01 0.03 0.03 0.00 0.02 ]
T [ 0.00 0.02 0.02 0.01 0.05 -0.02 -0.00 0.05 0.03 0.01 -0.02 0.13 -0.06 -0.08 0.07 0.01 -0.01 0.02 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3838

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 334

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 286

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 157

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 150

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 70

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 39

CWM

PFM

     

HCWM

3 profiles found for the same TF (NFE2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001040.1 NFE2 ENCSR000FAF K562 Homo sapiens MA0501.2
BP001041.1 NFE2 ENCSR000FCC K562 Homo sapiens MA0501.2
BP001043.1 NFE2 ENCSR983FBD HepG2 Homo sapiens MA0501.2
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