Detailed information of deep learning profile BP001041.1

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This page shows detailed deep learning-derived predictions and motifs for NFE2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFE2
Model ID: BP001041.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA0501.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16621  
Source: ENCSR000FCC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 0.00 0.04 -0.00 0.00 0.11 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.03 0.00 0.00 0.01 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.05 -0.00 0.04 -0.00 -0.00 0.08 -0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.12 -0.00 0.00 0.00 -0.00 0.00 0.06 -0.00 0.00 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.12 0.00 -0.00 -0.00 0.05 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.01 0.01 ]

Frequency matrix

       
A [ 5973 5991 7118 6321 6389 6090 6155 6669 6189 5841 6641 6074 7053 5932 6201 5997 8150 5503 7301 14400 18 2 23239 921 4409 3648 17123 1168 966 15505 8021 7859 7649 5499 4888 6085 5865 6320 5809 6041 5887 6383 6629 6684 6748 6986 6943 6846 6740 7127 ]
C [ 5827 5772 5170 5674 5052 5611 6271 5316 5789 5552 5992 6470 5414 5232 6342 6941 3886 5798 5257 1770 31 15 44 17138 687 15128 369 759 19370 2253 4420 2998 3166 5466 5811 5638 5780 5388 5689 6340 5108 5840 5282 5200 5312 5199 4927 5255 5063 5056 ]
G [ 5271 5415 5251 5468 5318 5832 5231 5130 5304 5643 5334 5181 5044 6200 5452 5579 5917 8066 7304 6989 3 23248 27 3437 1065 1961 2815 19000 1988 2397 5511 3832 2876 3098 4275 5271 5310 5568 5168 4998 5121 5441 5469 5596 5012 5291 4997 5132 5454 5324 ]
T [ 6284 6177 5816 5892 6596 5822 5698 6240 6073 6319 5388 5630 5844 5991 5360 4838 5402 3988 3493 196 23303 90 45 1859 17194 2618 3048 2428 1031 3200 5403 8666 9664 9292 8381 6361 6400 6079 6689 5976 7239 5691 5975 5875 6283 5879 6488 6122 6098 5848 ]

Hypothetical CWM

   
A [ 0.00 0.01 -0.01 0.01 0.06 -0.08 -0.06 0.11 -0.03 0.00 0.02 0.05 -0.01 -0.03 0.04 0.01 0.01 0.02 0.00 ]
C [ 0.01 0.00 0.02 0.02 -0.00 0.01 -0.05 -0.02 0.07 -0.04 0.06 -0.02 -0.01 0.09 -0.02 0.01 -0.01 -0.01 0.00 ]
G [ 0.01 0.02 0.02 0.03 0.04 -0.07 0.12 -0.04 0.04 0.02 -0.02 0.03 0.07 0.01 0.03 0.01 -0.00 -0.02 -0.02 ]
T [ -0.00 -0.01 0.00 -0.01 -0.06 0.12 0.02 -0.03 -0.00 0.06 -0.01 -0.02 0.02 -0.01 -0.01 0.01 0.02 0.02 0.02 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4795

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1565

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 708

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 206

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 174

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 69

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 33

CWM

PFM

     

HCWM

3 profiles found for the same TF (NFE2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001040.1 NFE2 ENCSR000FAF K562 Homo sapiens MA0501.2
BP001042.1 NFE2 ENCSR552YGL K562 Homo sapiens MA0501.2
BP001043.1 NFE2 ENCSR983FBD HepG2 Homo sapiens MA0501.2
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