Detailed information of deep learning profile BP001018.1

This page shows detailed deep learning-derived predictions and motifs for E2F6 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F6
Model ID: BP001018.1
Cell line/tissue: HeLa-S3
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0471.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75461  
Source: ENCSR000EVK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.01 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.00 -0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 0.00 0.01 0.03 -0.00 0.04 0.01 0.02 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]

Frequency matrix

A [ 273 276 255 289 275 281 285 286 282 257 302 268 298 264 290 296 245 287 252 232 323 308 431 346 533 416 248 2 132 0 5 9 1475 1091 569 425 319 228 274 320 276 277 284 281 313 262 252 286 283 274 ]
C [ 474 475 471 465 496 442 484 464 424 469 433 468 447 496 456 464 503 491 449 445 419 433 334 368 230 130 242 4 1344 2 23 40 9 26 294 368 355 438 446 408 409 402 452 430 418 406 430 438 411 449 ]
G [ 500 501 503 496 502 511 475 509 542 559 526 519 515 495 524 496 499 505 581 537 577 530 475 531 371 665 997 1489 1 1493 1454 1426 9 350 470 446 548 602 567 508 552 577 506 552 527 570 550 532 540 512 ]
T [ 248 243 266 245 222 261 251 236 247 210 234 240 235 240 225 239 248 212 213 281 176 224 255 250 361 284 8 0 18 0 13 20 2 28 162 256 273 227 208 259 258 239 253 232 237 257 263 239 261 260 ]

Hypothetical CWM

A [ 0.00 0.00 0.01 0.00 -0.00 -0.01 -0.00 -0.02 -0.02 -0.02 0.02 0.02 0.01 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.01 0.01 -0.02 0.03 -0.01 0.01 -0.00 -0.00 -0.01 -0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.01 0.03 -0.02 0.04 0.01 0.02 -0.01 -0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.01 0.00 -0.02 -0.02 -0.01 -0.02 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1454

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 140

4 profiles found for the same TF (E2F6) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001015.1 E2F6 ENCSR000BLI K562 Homo sapiens MA0471.3
BP001016.1 E2F6 ENCSR000BSI H1 Homo sapiens MA0471.3
BP001017.1 E2F6 ENCSR000BTC A549 Homo sapiens MA0471.3
BP001019.1 E2F6 ENCSR000EWJ K562 Homo sapiens MA0471.3
Showing 4 profiles of page 1 from 1 pages
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