JASPAR - E2F6 - BP001017.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F6 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F6
Model ID:	BP001017.1
Cell line/tissue:	A549
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0471.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O75461
Source:	ENCSR000BTC
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3525

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.03	0.02	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	]
G [	-0.00	0.01	0.04	-0.00	0.04	0.02	0.03	0.00	0.00	-0.00	0.00	0.00	]
T [	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	653	635	683	684	622	634	668	683	650	633	653	666	694	679	642	655	616	693	657	624	674	695	949	893	1191	980	475	2	293	0	9	16	3433	2495	1364	889	749	633	764	787	708	661	669	623	737	612	656	632	637	600	]
C [	1093	1086	1043	1033	1073	1042	1091	1066	1048	1085	1075	1035	1079	1085	1043	1088	1170	1040	1035	1044	997	1045	884	817	619	296	727	11	3153	8	98	153	34	70	673	880	911	1002	966	911	998	983	1063	1071	1006	1007	1031	1095	993	1038	]
G [	1187	1191	1199	1213	1203	1223	1159	1183	1224	1237	1226	1224	1182	1201	1231	1199	1160	1208	1212	1219	1375	1270	1147	1223	979	1547	2317	3512	15	3517	3388	3331	39	860	1084	1070	1153	1370	1273	1286	1253	1298	1250	1292	1192	1317	1245	1247	1284	1269	]
T [	592	613	600	595	627	626	607	593	603	570	571	600	570	560	609	583	579	584	621	638	479	515	545	592	736	702	6	0	64	0	30	25	19	100	404	686	712	520	522	541	566	583	543	539	590	589	593	551	611	618	]

Hypothetical CWM

A [	0.00	0.00	0.00	0.00	-0.00	-0.02	-0.01	-0.03	-0.04	-0.03	0.03	0.02	0.01	-0.00	-0.00	]
C [	0.00	-0.00	0.00	-0.00	0.01	-0.01	0.04	-0.00	0.01	0.00	-0.00	-0.01	0.00	0.00	0.00	]
G [	0.00	0.00	-0.00	0.01	0.01	0.04	-0.02	0.04	0.02	0.03	-0.01	0.00	-0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	0.00	-0.03	-0.03	-0.02	-0.03	-0.01	-0.02	-0.01	-0.01	-0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2939

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1122

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 399

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 288

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 153

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 54

CWM

PFM

HCWM

4 profiles found for the same TF (E2F6) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001015.1	E2F6	ENCSR000BLI	K562	Homo sapiens	MA0471.3
BP001016.1	E2F6	ENCSR000BSI	H1	Homo sapiens	MA0471.3
BP001018.1	E2F6	ENCSR000EVK	HeLa-S3	Homo sapiens	MA0471.3
BP001019.1	E2F6	ENCSR000EWJ	K562	Homo sapiens	MA0471.3