JASPAR - E2F6 - BP001017.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F6 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F6
Model ID:	BP001017.1
Cell line/tissue:	A549
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0471.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O75461
Source:	ENCSR000BTC
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3525

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	]
C [	0.00	0.00	-0.00	0.00	0.00	0.03	0.02	0.04	-0.00	0.04	0.01	-0.00	]
G [	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.02	0.03	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	]

Frequency matrix

A [	618	611	551	593	589	590	539	543	583	566	541	522	520	712	686	404	100	19	25	30	0	64	0	6	702	736	592	545	515	479	638	621	584	579	583	609	560	570	600	571	570	603	593	607	626	627	595	600	613	592	]
C [	1269	1284	1247	1245	1317	1192	1292	1250	1298	1253	1286	1273	1370	1153	1070	1084	860	39	3331	3388	3517	15	3512	2317	1547	979	1223	1147	1270	1375	1219	1212	1208	1160	1199	1231	1201	1182	1224	1226	1237	1224	1183	1159	1223	1203	1213	1199	1191	1187	]
G [	1038	993	1095	1031	1007	1006	1071	1063	983	998	911	966	1002	911	880	673	70	34	153	98	8	3153	11	727	296	619	817	884	1045	997	1044	1035	1040	1170	1088	1043	1085	1079	1035	1075	1085	1048	1066	1091	1042	1073	1033	1043	1086	1093	]
T [	600	637	632	656	612	737	623	669	661	708	787	764	633	749	889	1364	2495	3433	16	9	0	293	2	475	980	1191	893	949	695	674	624	657	693	616	655	642	679	694	666	653	633	650	683	668	634	622	684	683	635	653	]

Hypothetical CWM

A [	-0.00	0.00	-0.00	-0.01	-0.01	-0.02	-0.01	-0.03	-0.02	-0.03	-0.03	0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	-0.00	0.00	-0.01	0.03	0.02	0.04	-0.02	0.04	0.01	0.01	-0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.01	-0.00	0.00	0.01	-0.00	0.04	-0.01	0.01	-0.00	0.00	-0.00	0.00	]
T [	-0.00	-0.00	0.01	0.02	0.03	-0.03	-0.04	-0.03	-0.01	-0.02	-0.00	0.00	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2939

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1122

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 399

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 288

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 153

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 54

CWM

PFM

HCWM

4 profiles found for the same TF (E2F6) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001015.1	E2F6	ENCSR000BLI	K562	Homo sapiens	MA0471.3
BP001016.1	E2F6	ENCSR000BSI	H1	Homo sapiens	MA0471.3
BP001018.1	E2F6	ENCSR000EVK	HeLa-S3	Homo sapiens	MA0471.3
BP001019.1	E2F6	ENCSR000EWJ	K562	Homo sapiens	MA0471.3