Detailed information of deep learning profile BP000991.1

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This page shows detailed deep learning-derived predictions and motifs for TFE3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFE3
Model ID: BP000991.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0831.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19532  
Source: ENCSR953KEY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.02 -0.00 0.00 0.12 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.18 -0.00 0.16 0.00 -0.00 -0.00 -0.00 0.01 0.01 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.05 -0.00 0.00 0.00 -0.00 0.15 -0.00 0.18 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.10 0.00 -0.00 0.00 0.00 0.09 -0.00 -0.00 0.03 0.00 0.00 ]

Frequency matrix

       
A [ 2110 2351 2241 2262 2281 2078 2276 2310 2185 2260 2339 2512 2557 2221 2169 2804 3013 2388 20 2 8877 0 34 469 5 3697 391 1744 2633 1996 2301 2201 2081 2281 2214 2332 2109 2272 2232 2469 2450 2446 2205 2223 2436 2109 2245 2439 2143 2106 ]
C [ 2276 2165 1970 2090 2039 1991 1939 1981 2257 2014 2112 2026 2084 2092 2127 1448 764 134 66 8913 18 8651 2 90 8 1335 2132 3028 1993 2196 2056 2072 2334 2010 1939 1893 2129 2252 1972 2008 1979 2261 2252 2110 2024 2286 2053 2063 2240 2157 ]
G [ 2218 2102 2444 2234 2171 2261 2568 2353 2234 2113 2352 2311 2217 2329 2288 2489 3473 6389 31 5 11 16 8885 169 8892 2982 1384 1547 1742 2022 2090 2443 2132 2074 2375 2377 2258 2187 2230 2112 2371 2025 1991 2337 2102 2164 2154 2248 2261 2360 ]
T [ 2318 2304 2267 2336 2431 2592 2139 2278 2246 2535 2119 2073 2064 2280 2338 2181 1672 11 8805 2 16 255 1 8194 17 908 5015 2603 2554 2708 2475 2206 2375 2557 2394 2320 2426 2211 2488 2333 2122 2190 2474 2252 2360 2363 2470 2172 2278 2299 ]

Hypothetical CWM

   
A [ 0.01 0.00 0.02 0.02 0.07 -0.02 -0.04 0.12 -0.10 0.05 0.01 -0.05 0.09 -0.05 0.01 0.01 0.01 0.00 ]
C [ 0.01 0.01 0.00 0.00 -0.01 0.01 0.18 -0.05 0.16 -0.05 0.00 -0.04 0.00 0.07 0.03 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.03 0.08 -0.00 -0.03 0.00 -0.05 0.15 -0.04 0.18 0.01 -0.01 0.00 0.00 0.01 0.01 ]
T [ 0.01 0.01 0.01 0.01 -0.07 0.10 -0.05 -0.02 0.05 -0.10 0.10 -0.03 -0.02 0.06 0.02 0.02 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 12275

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1291

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 345

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 61

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 34

CWM

PFM

     

HCWM

1 profiles found for the same TF (TFE3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000990.1 TFE3 ENCSR589SNT HepG2 Homo sapiens MA0831.3
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