Detailed information of deep learning profile BP000990.1

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This page shows detailed deep learning-derived predictions and motifs for TFE3 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFE3
Model ID: BP000990.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0831.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19532  
Source: ENCSR589SNT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.06 -0.00 0.04 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 0.03 -0.00 0.05 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.03 0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 1216 1189 1154 1128 1165 1106 1226 1207 1159 1119 1127 1207 1092 1128 1134 1178 1129 1074 1036 1159 1434 1672 1094 88 5 4978 5 1547 616 5 1719 455 869 1142 967 1037 1110 988 1073 1096 1207 1261 1108 1161 1228 1214 1171 1104 1147 1140 ]
C [ 1388 1394 1454 1345 1372 1374 1317 1357 1366 1417 1341 1317 1364 1403 1374 1511 1541 1585 1565 1503 1307 534 240 263 5051 46 4242 329 195 30 1173 1745 1815 1361 1381 1287 1332 1444 1266 1298 1334 1362 1511 1472 1334 1341 1427 1474 1422 1427 ]
G [ 1382 1336 1371 1493 1437 1467 1475 1518 1427 1426 1467 1568 1556 1415 1492 1392 1456 1364 1485 1406 1446 2086 3659 281 25 45 199 3210 248 5035 1647 796 1005 1399 1657 1556 1558 1529 1546 1473 1531 1448 1331 1345 1406 1463 1402 1410 1380 1385 ]
T [ 1107 1174 1114 1127 1119 1146 1075 1011 1141 1131 1158 1001 1081 1147 1093 1012 967 1070 1007 1025 906 801 100 4461 12 24 647 7 4034 23 554 2097 1404 1191 1088 1213 1093 1132 1208 1226 1021 1022 1143 1115 1125 1075 1093 1105 1144 1141 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.01 0.01 -0.01 -0.00 0.04 -0.04 0.01 0.00 -0.01 0.03 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.01 0.00 0.06 -0.01 0.05 -0.00 0.01 -0.03 0.00 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.03 0.00 -0.03 0.01 0.00 0.06 -0.01 0.05 0.00 -0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.04 -0.01 -0.00 0.01 -0.04 0.03 -0.00 -0.01 0.01 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1494

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 918

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 676

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 524

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 329

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 22

CWM

PFM

     

HCWM

1 profiles found for the same TF (TFE3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000991.1 TFE3 ENCSR953KEY K562 Homo sapiens MA0831.3
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