Detailed information of deep learning profile BP000903.1

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This page shows detailed deep learning-derived predictions and motifs for TFDP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFDP1
Model ID: BP000903.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA1122.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14186  
Source: ENCSR901VIE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 0.02 0.02 0.04 -0.00 0.04 0.01 0.00 -0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.02 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 539 560 560 488 538 576 521 563 509 545 513 520 522 522 509 558 497 506 610 527 451 444 486 599 667 345 105 30 23 21 0 1 0 16 641 716 495 545 480 429 554 571 473 569 531 530 504 498 548 569 ]
C [ 1163 1196 1169 1153 1165 1207 1191 1163 1232 1211 1221 1242 1160 1202 1256 1217 1176 1237 1180 1213 1295 1290 1334 1244 923 1082 947 54 3104 3194 3309 12 3296 2071 1537 853 1201 990 1250 1243 1171 1221 1153 1180 1226 1225 1200 1204 1184 1165 ]
G [ 1037 982 975 1038 1034 1006 1008 1049 956 1015 998 956 1022 1003 984 899 1064 1010 952 936 832 930 920 843 904 732 96 46 163 91 1 3275 10 832 358 642 767 837 939 962 945 900 1075 1032 954 977 1047 996 1015 996 ]
T [ 571 572 606 631 573 521 590 535 613 539 578 592 606 583 561 636 573 557 568 634 732 646 570 624 816 1151 2162 3180 20 4 0 22 4 391 774 1099 847 938 641 676 640 618 609 529 599 578 559 612 563 580 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.01 -0.01 -0.01 -0.02 -0.03 -0.02 -0.03 -0.03 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.01 0.02 0.02 0.04 -0.01 0.04 0.01 0.01 -0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.01 0.00 0.00 0.02 -0.01 0.04 -0.01 0.01 -0.00 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.02 -0.02 -0.03 -0.03 -0.01 -0.02 -0.01 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6072

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 389

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 266

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 140

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 127

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFDP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000901.1 TFDP1 ENCSR017GBO K562 Homo sapiens MA1122.2
BP000902.1 TFDP1 ENCSR558OMR HepG2 Homo sapiens MA1122.2
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