Detailed information of deep learning profile BP000901.1

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This page shows detailed deep learning-derived predictions and motifs for TFDP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFDP1
Model ID: BP000901.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA1122.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14186  
Source: ENCSR017GBO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.02 0.03 0.00 0.03 0.01 0.00 -0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.01 0.02 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 489 478 490 480 427 490 496 456 500 451 485 481 435 427 459 475 478 439 445 547 497 434 420 492 672 631 386 120 50 28 16 7 3 0 4 760 636 456 431 400 365 479 477 418 493 479 502 455 439 493 ]
C [ 942 987 963 970 1013 982 1022 1001 943 1033 996 1065 1068 1031 1016 1083 967 990 1079 966 1021 993 1146 1096 955 781 841 726 51 2634 2772 2801 3 2783 2225 993 800 1021 904 1027 1054 976 992 949 1019 1030 1020 1018 979 936 ]
G [ 875 872 869 810 823 852 836 833 879 824 859 795 808 836 812 755 849 877 808 783 707 720 702 785 713 750 613 125 63 122 24 6 2760 26 170 393 564 654 727 762 812 778 781 902 859 741 841 840 878 874 ]
T [ 509 478 493 555 552 491 461 525 493 507 475 474 504 521 528 502 521 509 483 519 590 668 547 442 475 653 975 1844 2651 31 3 1 49 6 416 669 815 684 753 626 584 582 565 546 444 565 452 502 519 512 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.02 -0.02 -0.02 -0.02 0.01 0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.01 0.02 0.02 0.03 -0.01 0.03 0.01 0.00 -0.00 0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.01 -0.00 0.00 0.01 -0.01 0.03 -0.00 0.01 -0.00 0.00 0.00 -0.00 ]
T [ 0.00 -0.00 0.00 0.01 0.01 0.02 -0.01 -0.02 -0.02 -0.00 -0.01 0.00 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3118

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 765

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 741

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 642

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 179

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFDP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000902.1 TFDP1 ENCSR558OMR HepG2 Homo sapiens MA1122.2
BP000903.1 TFDP1 ENCSR901VIE K562 Homo sapiens MA1122.2
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