Detailed information of deep learning profile BP000903.1

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This page shows detailed deep learning-derived predictions and motifs for TFDP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFDP1
Model ID: BP000903.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA1122.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14186  
Source: ENCSR901VIE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.02 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 -0.00 0.00 0.01 0.04 -0.00 0.04 0.02 0.02 -0.00 0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 580 563 612 559 578 599 529 609 618 640 676 641 938 847 1099 774 391 4 22 0 4 20 3180 2162 1151 816 624 570 646 732 634 568 557 573 636 561 583 606 592 578 539 613 535 590 521 573 631 606 572 571 ]
C [ 996 1015 996 1047 977 954 1032 1075 900 945 962 939 837 767 642 358 832 10 3275 1 91 163 46 96 732 904 843 920 930 832 936 952 1010 1064 899 984 1003 1022 956 998 1015 956 1049 1008 1006 1034 1038 975 982 1037 ]
G [ 1165 1184 1204 1200 1225 1226 1180 1153 1221 1171 1243 1250 990 1201 853 1537 2071 3296 12 3309 3194 3104 54 947 1082 923 1244 1334 1290 1295 1213 1180 1237 1176 1217 1256 1202 1160 1242 1221 1211 1232 1163 1191 1207 1165 1153 1169 1196 1163 ]
T [ 569 548 498 504 530 531 569 473 571 554 429 480 545 495 716 641 16 0 1 0 21 23 30 105 345 667 599 486 444 451 527 610 506 497 558 509 522 522 520 513 545 509 563 521 576 538 488 560 560 539 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 -0.01 -0.02 -0.01 -0.03 -0.03 -0.02 0.02 0.01 0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.00 -0.00 0.01 -0.01 0.04 -0.01 0.02 0.00 0.00 -0.01 0.00 0.00 0.00 ]
G [ -0.00 0.00 -0.00 0.01 0.01 0.04 -0.01 0.04 0.02 0.02 -0.01 0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.03 -0.03 -0.02 -0.03 -0.02 -0.01 -0.01 -0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6072

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 389

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 266

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 140

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 127

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFDP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000901.1 TFDP1 ENCSR017GBO K562 Homo sapiens MA1122.2
BP000902.1 TFDP1 ENCSR558OMR HepG2 Homo sapiens MA1122.2
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