Detailed information of deep learning profile BP000902.1

  1. Home
  2. Deep Learning Profile > BP000902.1
This page shows detailed deep learning-derived predictions and motifs for TFDP1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFDP1
Model ID: BP000902.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA1122.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14186  
Source: ENCSR558OMR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 0.02 0.02 0.04 0.00 0.03 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.02 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 538 567 527 576 550 556 545 588 486 526 472 553 617 757 549 203 79 54 5 1 2 1 13 768 689 468 446 483 428 575 567 500 582 596 595 574 519 592 486 505 548 516 550 575 578 549 560 526 570 595 ]
C [ 1164 1072 1109 1143 1073 1085 1135 1126 1185 1143 1191 1121 1154 929 972 834 136 2895 3155 3166 0 3139 2725 1179 1001 1180 1051 1150 1214 1117 1031 1052 1047 1067 1098 1075 1093 1033 1109 1146 1117 1084 1039 1091 1092 1074 1056 1077 1058 1037 ]
G [ 878 923 977 868 918 935 882 853 827 829 847 993 759 669 700 350 183 117 9 4 3157 32 38 367 592 698 864 906 953 860 967 1029 976 909 954 953 980 961 957 939 901 978 926 960 936 945 935 996 958 981 ]
T [ 592 610 559 585 631 596 610 605 674 674 662 505 642 817 951 1785 2774 106 3 1 13 0 396 858 890 826 811 633 577 620 607 591 567 600 525 570 580 586 620 582 606 594 657 546 566 604 621 573 586 559 ]

Hypothetical CWM

   
A [ 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.02 -0.03 -0.02 -0.03 -0.03 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.01 0.02 0.02 0.04 -0.02 0.03 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 0.04 -0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.01 0.01 0.02 -0.01 -0.03 -0.02 -0.01 -0.01 -0.00 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 640

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 559

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 464

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 407

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 340

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 219

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 204

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 200

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 146

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 87

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 68

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 61

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 42

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFDP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000901.1 TFDP1 ENCSR017GBO K562 Homo sapiens MA1122.2
BP000903.1 TFDP1 ENCSR901VIE K562 Homo sapiens MA1122.2
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)