Detailed information of deep learning profile BP000897.1

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This page shows detailed deep learning-derived predictions and motifs for ETV6 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV6
Model ID: BP000897.1
Cell line/tissue: GM12878
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0645.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P41212  
Source: ENCSR626VUC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.01 0.00 0.00 0.04 0.04 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.03 0.04 0.00 -0.00 0.00 -0.00 0.01 0.01 ]

Frequency matrix

       
A [ 2635 2608 2614 2646 2662 2701 2577 2630 2692 2726 2650 2671 2801 2627 2494 2657 3099 2918 2398 2542 2350 1199 1374 7797 16 310 6 9 6 135 386 1334 1700 1779 1881 2773 2420 2608 2478 2445 2460 2647 2692 2648 2725 2613 2519 2653 2617 2590 ]
C [ 3035 2965 2957 3006 3016 2849 3024 3039 3002 2943 2922 2967 2906 2954 3029 3206 2957 3009 3118 2829 3508 4438 5574 322 7275 1 7 11119 11155 1311 4399 2684 2361 2824 3950 2882 2845 2803 2872 3041 3178 3016 3098 2988 2928 2753 2861 2965 3010 2969 ]
G [ 2566 2530 2639 2533 2526 2591 2600 2466 2533 2550 2599 2554 2412 2512 2600 2438 2449 2629 2370 2022 2419 1784 1370 2525 539 3 1 1 0 2361 4616 1063 1433 1909 2489 2581 3108 2501 2524 2565 2436 2464 2517 2467 2550 2498 2679 2525 2471 2524 ]
T [ 2960 3093 2986 3011 2992 3055 2995 3061 2969 2977 3025 3004 3077 3103 3073 2895 2691 2640 3310 3803 2919 3775 2878 552 3366 10882 11182 67 35 7389 1795 6115 5702 4684 2876 2960 2823 3284 3322 3145 3122 3069 2889 3093 2993 3332 3137 3053 3098 3113 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.02 -0.02 0.01 -0.00 -0.02 -0.02 -0.02 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.01 0.02 -0.01 0.02 -0.03 -0.02 0.04 0.04 0.00 0.01 0.00 0.00 0.00 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.00 0.00 0.02 0.01 -0.01 -0.02 -0.01 -0.00 0.03 0.01 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 0.01 0.00 -0.01 0.01 0.03 0.04 0.00 -0.00 0.01 -0.00 0.01 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5043

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3164

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1897

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1689

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1462

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1108

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 536

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 320

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 174

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 129

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 31

CWM

PFM

     

HCWM

4 profiles found for the same TF (ETV6) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000894.1 ETV6 ENCSR000FCE K562 Homo sapiens MA0645.2
BP000895.1 ETV6 ENCSR029TLS WTC11 Homo sapiens MA0645.2
BP000896.1 ETV6 ENCSR124BJR K562 Homo sapiens MA0645.2
BP000898.1 ETV6 ENCSR925TWM HepG2 Homo sapiens MA0645.2
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