Detailed information of deep learning profile BP000895.1

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This page shows detailed deep learning-derived predictions and motifs for ETV6 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV6
Model ID: BP000895.1
Cell line/tissue: WTC11
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0645.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P41212  
Source: ENCSR029TLS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.01 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.02 0.00 0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 888 854 832 827 857 874 819 862 857 872 884 861 761 806 881 903 865 925 909 982 780 1003 1344 1142 246 1599 0 0 3744 3774 1161 276 697 914 909 1000 807 856 655 783 915 865 766 809 813 791 732 861 795 836 ]
C [ 1094 1033 1079 1081 1056 1070 1069 1055 1102 1093 975 992 1031 1161 1049 1046 1062 966 1008 1096 995 1028 538 751 2543 2043 1 2 7 3 91 924 600 972 1405 943 1064 1011 1097 1067 920 955 1017 1076 953 1093 1112 1015 1088 1030 ]
G [ 1142 1179 1178 1171 1157 1166 1184 1175 1166 1119 1198 1126 1245 1077 1088 1119 1172 1224 1161 1191 1388 1067 1145 1558 949 115 3796 3782 37 3 2445 205 1907 1504 1027 926 1164 1137 1195 1112 1247 1269 1254 1214 1277 1214 1188 1144 1229 1173 ]
T [ 676 734 711 721 730 690 728 708 675 716 743 821 763 756 782 732 701 685 722 531 637 702 773 349 62 43 3 16 12 20 103 2395 596 410 459 931 765 796 853 838 718 711 763 701 757 702 768 780 688 761 ]

Hypothetical CWM

   
A [ -0.01 -0.00 -0.00 -0.00 -0.01 -0.00 -0.02 -0.02 0.01 0.01 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.01 0.02 0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.02 0.02 -0.01 -0.01 0.01 -0.00 0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 -0.01 0.00 -0.00 -0.01 -0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1683

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1634

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 502

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 502

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 87

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 75

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 44

CWM

PFM

     

HCWM

4 profiles found for the same TF (ETV6) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000894.1 ETV6 ENCSR000FCE K562 Homo sapiens MA0645.2
BP000896.1 ETV6 ENCSR124BJR K562 Homo sapiens MA0645.2
BP000897.1 ETV6 ENCSR626VUC GM12878 Homo sapiens MA0645.2
BP000898.1 ETV6 ENCSR925TWM HepG2 Homo sapiens MA0645.2
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