Detailed information of deep learning profile BP000897.1

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This page shows detailed deep learning-derived predictions and motifs for ETV6 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV6
Model ID: BP000897.1
Cell line/tissue: GM12878
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0645.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P41212  
Source: ENCSR626VUC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 -0.00 0.00 -0.00 0.00 0.04 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.04 0.04 0.00 0.00 0.01 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 3113 3098 3053 3137 3332 2993 3093 2889 3069 3122 3145 3322 3284 2823 2960 2876 4684 5702 6115 1795 7389 35 67 11182 10882 3366 552 2878 3775 2919 3803 3310 2640 2691 2895 3073 3103 3077 3004 3025 2977 2969 3061 2995 3055 2992 3011 2986 3093 2960 ]
C [ 2524 2471 2525 2679 2498 2550 2467 2517 2464 2436 2565 2524 2501 3108 2581 2489 1909 1433 1063 4616 2361 0 1 1 3 539 2525 1370 1784 2419 2022 2370 2629 2449 2438 2600 2512 2412 2554 2599 2550 2533 2466 2600 2591 2526 2533 2639 2530 2566 ]
G [ 2969 3010 2965 2861 2753 2928 2988 3098 3016 3178 3041 2872 2803 2845 2882 3950 2824 2361 2684 4399 1311 11155 11119 7 1 7275 322 5574 4438 3508 2829 3118 3009 2957 3206 3029 2954 2906 2967 2922 2943 3002 3039 3024 2849 3016 3006 2957 2965 3035 ]
T [ 2590 2617 2653 2519 2613 2725 2648 2692 2647 2460 2445 2478 2608 2420 2773 1881 1779 1700 1334 386 135 6 9 6 310 16 7797 1374 1199 2350 2542 2398 2918 3099 2657 2494 2627 2801 2671 2650 2726 2692 2630 2577 2701 2662 2646 2614 2608 2635 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.01 -0.00 0.01 -0.00 0.00 0.04 0.03 0.01 -0.01 0.00 0.01 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.01 0.03 -0.00 -0.01 -0.02 -0.01 0.01 0.02 0.00 0.00 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.00 0.00 0.00 0.01 0.00 0.04 0.04 -0.02 -0.03 0.02 -0.01 0.02 0.01 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.02 -0.02 -0.02 -0.00 0.01 -0.02 0.02 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5043

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3164

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1897

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1689

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1462

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1108

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 536

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 320

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 174

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 129

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 31

CWM

PFM

     

HCWM

4 profiles found for the same TF (ETV6) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000894.1 ETV6 ENCSR000FCE K562 Homo sapiens MA0645.2
BP000895.1 ETV6 ENCSR029TLS WTC11 Homo sapiens MA0645.2
BP000896.1 ETV6 ENCSR124BJR K562 Homo sapiens MA0645.2
BP000898.1 ETV6 ENCSR925TWM HepG2 Homo sapiens MA0645.2
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