JASPAR - MXI1 - BP000817.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for MXI1 in neural cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	MXI1
Model ID:	BP000817.1
Cell line/tissue:	neural cell
Class:	Basic helix-loop-helix factors (bHLH)
Family:	bHLH-ZIP
JASPAR ID:	MA1108.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P50539
Source:	ENCSR934NHU
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3498

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	-0.00	0.03	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.04	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.04	-0.00	0.03	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.03	-0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	652	679	697	652	711	707	632	637	666	616	641	685	613	662	604	647	630	702	658	855	794	664	13	3466	0	3	410	1	391	625	538	652	599	634	611	683	648	653	707	669	604	665	627	665	667	657	642	665	614	622	]
C [	1106	1067	1114	1100	1085	1074	1159	1125	1097	1135	1129	1077	1075	1144	1067	1222	1140	1025	1212	931	1198	1037	3484	0	3496	0	8	12	356	1259	1045	1124	1147	1056	1065	1037	1011	992	1115	1000	1171	1058	1129	1065	1067	1093	1141	1053	1103	1105	]
G [	1041	1136	1029	1108	1099	1074	1106	1105	1075	1150	1098	1064	1184	1061	1201	1036	1166	1258	1065	1242	846	1527	1	3	0	3495	2	3311	2061	872	1083	1097	1074	1245	1237	1152	1186	1241	1040	1246	1109	1122	1082	1203	1058	1111	1106	1101	1115	1157	]
T [	699	616	658	638	603	643	601	631	660	597	630	672	626	631	626	593	562	513	563	470	660	270	0	29	2	0	3078	174	690	742	832	625	678	563	585	626	653	612	636	583	614	653	660	565	706	637	609	679	666	614	]

Hypothetical CWM

A [	0.00	0.01	0.00	0.01	-0.01	0.03	-0.04	0.01	-0.01	-0.02	-0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.01	0.01	0.04	-0.03	0.04	-0.03	0.02	-0.02	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	-0.02	0.02	-0.03	0.04	-0.03	0.03	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.02	-0.02	-0.01	0.02	-0.04	0.03	-0.00	0.01	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3020

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2133

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2027

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1998

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 665

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 538

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 440

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 347

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 340

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 325

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 294

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 253

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 39

CWM

PFM

HCWM

7 profiles found for the same TF (MXI1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000810.1	MXI1	ENCSR000DZI	GM12878	Homo sapiens	MA1108.3
BP000811.1	MXI1	ENCSR000EBR	H1	Homo sapiens	MA1108.3
BP000812.1	MXI1	ENCSR000ECU	HeLa-S3	Homo sapiens	MA1108.3
BP000813.1	MXI1	ENCSR000EDU	HepG2	Homo sapiens	MA1108.3
BP000814.1	MXI1	ENCSR000EFE	IMR-90	Homo sapiens	MA1108.3
BP000815.1	MXI1	ENCSR000EGZ	K562	Homo sapiens	MA1108.3
BP000816.1	MXI1	ENCSR000EIA	SK-N-SH	Homo sapiens	MA1108.3