Detailed information of deep learning profile BP000816.1

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This page shows detailed deep learning-derived predictions and motifs for MXI1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MXI1
Model ID: BP000816.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA1108.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P50539  
Source: ENCSR000EIA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 -0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 870 947 918 901 866 923 877 902 882 952 857 886 861 938 856 929 828 932 927 1168 920 898 255 4009 0 5 25 0 339 839 667 774 701 840 852 828 859 917 852 924 857 887 874 927 921 943 884 953 937 906 ]
C [ 1287 1226 1262 1224 1297 1247 1240 1220 1281 1227 1300 1199 1323 1311 1311 1265 1296 1255 1332 992 1068 2019 4020 2 4281 0 0 0 1501 1136 1356 1284 1366 1186 1169 1239 1162 1163 1242 1253 1301 1255 1239 1177 1228 1231 1234 1206 1257 1235 ]
G [ 1254 1257 1217 1310 1285 1254 1285 1284 1260 1256 1244 1289 1219 1234 1247 1244 1363 1383 1148 1377 1595 663 6 30 0 4276 0 4278 1600 1123 1053 1318 1236 1367 1384 1261 1334 1355 1319 1239 1244 1306 1287 1356 1240 1216 1248 1235 1236 1281 ]
T [ 870 851 884 846 833 857 879 875 858 846 880 907 878 798 867 843 794 711 874 744 698 701 0 240 0 0 4256 3 841 1183 1205 905 978 888 876 953 926 846 868 865 879 833 881 821 892 891 915 887 851 859 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.01 0.00 0.03 -0.04 0.03 -0.01 -0.02 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.05 -0.04 0.06 -0.05 0.03 -0.02 0.02 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 0.01 -0.02 0.02 -0.04 0.05 -0.04 0.05 0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.01 0.03 -0.04 0.04 0.00 0.01 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5201

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3793

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2694

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1252

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1210

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 772

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 708

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 299

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 247

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 115

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 21

CWM

PFM

     

HCWM

7 profiles found for the same TF (MXI1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000810.1 MXI1 ENCSR000DZI GM12878 Homo sapiens MA1108.3
BP000811.1 MXI1 ENCSR000EBR H1 Homo sapiens MA1108.3
BP000812.1 MXI1 ENCSR000ECU HeLa-S3 Homo sapiens MA1108.3
BP000813.1 MXI1 ENCSR000EDU HepG2 Homo sapiens MA1108.3
BP000814.1 MXI1 ENCSR000EFE IMR-90 Homo sapiens MA1108.3
BP000815.1 MXI1 ENCSR000EGZ K562 Homo sapiens MA1108.3
BP000817.1 MXI1 ENCSR934NHU neural cell Homo sapiens MA1108.3
Showing 7 profiles of page 1 from 1 pages
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