JASPAR - MXI1 - BP000817.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for MXI1 in neural cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	MXI1
Model ID:	BP000817.1
Cell line/tissue:	neural cell
Class:	Basic helix-loop-helix factors (bHLH)
Family:	bHLH-ZIP
JASPAR ID:	MA1108.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P50539
Source:	ENCSR934NHU
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3498

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	-0.00	0.03	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.03	-0.00	0.04	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.04	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.03	-0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	614	666	679	609	637	706	565	660	653	614	583	636	612	653	626	585	563	678	625	832	742	690	174	3078	0	2	29	0	270	660	470	563	513	562	593	626	631	626	672	630	597	660	631	601	643	603	638	658	616	699	]
C [	1157	1115	1101	1106	1111	1058	1203	1082	1122	1109	1246	1040	1241	1186	1152	1237	1245	1074	1097	1083	872	2061	3311	2	3495	0	3	1	1527	846	1242	1065	1258	1166	1036	1201	1061	1184	1064	1098	1150	1075	1105	1106	1074	1099	1108	1029	1136	1041	]
G [	1105	1103	1053	1141	1093	1067	1065	1129	1058	1171	1000	1115	992	1011	1037	1065	1056	1147	1124	1045	1259	356	12	8	0	3496	0	3484	1037	1198	931	1212	1025	1140	1222	1067	1144	1075	1077	1129	1135	1097	1125	1159	1074	1085	1100	1114	1067	1106	]
T [	622	614	665	642	657	667	665	627	665	604	669	707	653	648	683	611	634	599	652	538	625	391	1	410	3	0	3466	13	664	794	855	658	702	630	647	604	662	613	685	641	616	666	637	632	707	711	652	697	679	652	]

Hypothetical CWM

A [	0.00	0.00	0.00	0.01	-0.00	0.03	-0.04	0.02	-0.01	-0.02	-0.02	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.03	-0.03	0.04	-0.03	0.02	-0.02	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.01	-0.02	0.02	-0.03	0.04	-0.03	0.04	0.01	0.01	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.01	-0.02	-0.01	0.01	-0.04	0.03	-0.01	0.01	0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3020

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2133

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2027

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1998

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 665

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 538

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 440

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 347

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 340

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 325

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 294

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 253

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 39

CWM

PFM

HCWM

7 profiles found for the same TF (MXI1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000810.1	MXI1	ENCSR000DZI	GM12878	Homo sapiens	MA1108.3
BP000811.1	MXI1	ENCSR000EBR	H1	Homo sapiens	MA1108.3
BP000812.1	MXI1	ENCSR000ECU	HeLa-S3	Homo sapiens	MA1108.3
BP000813.1	MXI1	ENCSR000EDU	HepG2	Homo sapiens	MA1108.3
BP000814.1	MXI1	ENCSR000EFE	IMR-90	Homo sapiens	MA1108.3
BP000815.1	MXI1	ENCSR000EGZ	K562	Homo sapiens	MA1108.3
BP000816.1	MXI1	ENCSR000EIA	SK-N-SH	Homo sapiens	MA1108.3