JASPAR - MXI1 - BP000814.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for MXI1 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	MXI1
Model ID:	BP000814.1
Cell line/tissue:	IMR-90
Class:	Basic helix-loop-helix factors (bHLH)
Family:	bHLH-ZIP
JASPAR ID:	MA1108.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P50539
Source:	ENCSR000EFE
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3709

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.05	-0.00	0.07	0.00	0.00	0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.06	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	757	772	792	772	709	811	737	767	737	733	697	800	737	733	689	738	606	784	764	793	748	691	155	3282	0	0	64	0	276	698	509	675	541	633	712	782	736	697	776	754	727	755	757	737	787	773	756	785	779	754	]
C [	1090	1087	1124	1072	1133	1063	1093	1113	1154	1108	1254	1088	1145	1193	1147	1211	1256	1138	1191	960	920	2507	3549	4	3709	0	1	1	1542	900	1198	1137	1230	1071	1043	1106	1036	1112	1075	1080	1176	1118	1106	1102	1109	1052	1130	1050	1111	1118	]
G [	1104	1110	1048	1107	1118	1106	1154	1125	1076	1200	1029	1096	1070	1080	1164	1054	1146	1143	1029	1214	1335	236	3	0	0	3709	0	3708	1218	1097	944	1118	1123	1253	1267	1070	1177	1141	1084	1176	1091	1121	1101	1174	1040	1113	1085	1105	1061	1106	]
T [	758	740	745	758	749	729	725	704	742	668	729	725	757	703	709	706	701	644	725	742	706	275	2	423	0	0	3644	0	673	1014	1058	779	815	752	687	751	760	759	774	699	715	715	745	696	773	771	738	769	758	731	]

Hypothetical CWM

A [	0.00	0.00	0.01	0.01	-0.00	0.03	-0.05	0.03	-0.01	-0.03	-0.02	-0.00	-0.00	-0.00	]
C [	0.01	0.00	0.00	0.01	0.05	-0.05	0.07	-0.07	0.03	-0.03	0.02	0.01	0.01	0.01	]
G [	0.00	0.01	0.01	0.01	-0.03	0.03	-0.07	0.07	-0.05	0.06	0.01	0.01	0.00	0.01	]
T [	-0.00	-0.00	-0.00	-0.02	-0.03	-0.01	0.03	-0.05	0.04	-0.00	0.01	0.01	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3335

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2218

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1840

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1322

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 178

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 129

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 110

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 29

CWM

PFM

HCWM

7 profiles found for the same TF (MXI1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000810.1	MXI1	ENCSR000DZI	GM12878	Homo sapiens	MA1108.3
BP000811.1	MXI1	ENCSR000EBR	H1	Homo sapiens	MA1108.3
BP000812.1	MXI1	ENCSR000ECU	HeLa-S3	Homo sapiens	MA1108.3
BP000813.1	MXI1	ENCSR000EDU	HepG2	Homo sapiens	MA1108.3
BP000815.1	MXI1	ENCSR000EGZ	K562	Homo sapiens	MA1108.3
BP000816.1	MXI1	ENCSR000EIA	SK-N-SH	Homo sapiens	MA1108.3
BP000817.1	MXI1	ENCSR934NHU	neural cell	Homo sapiens	MA1108.3