JASPAR - MXI1 - BP000814.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for MXI1 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	MXI1
Model ID:	BP000814.1
Cell line/tissue:	IMR-90
Class:	Basic helix-loop-helix factors (bHLH)
Family:	bHLH-ZIP
JASPAR ID:	MA1108.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P50539
Source:	ENCSR000EFE
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3709

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.06	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.07	-0.00	0.05	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	731	758	769	738	771	773	696	745	715	715	699	774	759	760	751	687	752	815	779	1058	1014	673	0	3644	0	0	423	2	275	706	742	725	644	701	706	709	703	757	725	729	668	742	704	725	729	749	758	745	740	758	]
C [	1106	1061	1105	1085	1113	1040	1174	1101	1121	1091	1176	1084	1141	1177	1070	1267	1253	1123	1118	944	1097	1218	3708	0	3709	0	0	3	236	1335	1214	1029	1143	1146	1054	1164	1080	1070	1096	1029	1200	1076	1125	1154	1106	1118	1107	1048	1110	1104	]
G [	1118	1111	1050	1130	1052	1109	1102	1106	1118	1176	1080	1075	1112	1036	1106	1043	1071	1230	1137	1198	900	1542	1	1	0	3709	4	3549	2507	920	960	1191	1138	1256	1211	1147	1193	1145	1088	1254	1108	1154	1113	1093	1063	1133	1072	1124	1087	1090	]
T [	754	779	785	756	773	787	737	757	755	727	754	776	697	736	782	712	633	541	675	509	698	276	0	64	0	0	3282	155	691	748	793	764	784	606	738	689	733	737	800	697	733	737	767	737	811	709	772	792	772	757	]

Hypothetical CWM

A [	0.00	0.01	0.01	0.01	-0.00	0.04	-0.05	0.03	-0.01	-0.03	-0.02	-0.00	-0.00	-0.00	]
C [	0.01	0.00	0.01	0.01	0.06	-0.05	0.07	-0.07	0.03	-0.03	0.01	0.01	0.01	0.00	]
G [	0.01	0.01	0.01	0.02	-0.03	0.03	-0.07	0.07	-0.05	0.05	0.01	0.00	0.00	0.01	]
T [	-0.00	-0.00	-0.00	-0.02	-0.03	-0.01	0.03	-0.05	0.03	-0.00	0.01	0.01	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3335

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2218

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1840

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1322

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 178

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 129

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 110

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 29

CWM

PFM

HCWM

7 profiles found for the same TF (MXI1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000810.1	MXI1	ENCSR000DZI	GM12878	Homo sapiens	MA1108.3
BP000811.1	MXI1	ENCSR000EBR	H1	Homo sapiens	MA1108.3
BP000812.1	MXI1	ENCSR000ECU	HeLa-S3	Homo sapiens	MA1108.3
BP000813.1	MXI1	ENCSR000EDU	HepG2	Homo sapiens	MA1108.3
BP000815.1	MXI1	ENCSR000EGZ	K562	Homo sapiens	MA1108.3
BP000816.1	MXI1	ENCSR000EIA	SK-N-SH	Homo sapiens	MA1108.3
BP000817.1	MXI1	ENCSR934NHU	neural cell	Homo sapiens	MA1108.3